RNA–Protein interactions for RNA: ENST00000376568.7

DDR1-225, Transcript of discoidin domain receptor tyrosine kinase 1, human

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDR1, Length 3,894 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-225	ENST00000376568	GPBP1	Q86WP2	473 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	RGL1	Q9NZL6	768 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	TRPA1	O75762	1119 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	BMP15	O95972	392 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	VCAM1	P19320	739 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	ARHGAP4	P98171	946 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	MCM6	Q14566	821 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	SCYL3	Q8IZE3	742 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	CYP2W1	Q8TAV3	490 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	MAD2L2	Q9UI95	211 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	HPS3	Q969F9	1004 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	CEP89	Q96ST8	783 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	FAM49A	Q9H0Q0	323 aa	Predicted RBP	15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	DACH1	Q9UI36	760 aa		15.18	■□□□□ 0.02
DDR1-225	ENST00000376568	HDLBP	Q00341	1268 aa	Known RBP	15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	TSGA10IP	Q3SY00	556 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	MTERF2	Q49AM1	385 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	PCDHA5	Q9Y5H7	936 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	CUTA	O60888	179 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	GCNT3	O95395	438 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	SEC23A	Q15436	765 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	TNPO2	O14787	897 aa	Known RBP	15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	PTGER2	P43116	358 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	EARS2	Q5JPH6	523 aa	Known RBP	15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	DPF2	Q92785	391 aa		15.17	■□□□□ 0.02
DDR1-225	ENST00000376568	CYTH3	O43739	400 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	CTNND1	O60716	968 aa	Known RBP	15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	SLC39A14	Q15043	492 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	GNPTAB	Q3T906	1256 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	CACNA2D4	Q7Z3S7	1137 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	BARHL2	Q9NY43	387 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	SEPT9	Q9UHD8	586 aa	Predicted RBP	15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	PCDHB13	Q9Y5F0	798 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	ELP1	O95163	1332 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	GLTPD2	A6NH11	291 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	GAS2L3	Q86XJ1	694 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	MCF2L2	Q86YR7	1114 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	APOL6	Q9BWW8	343 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	TAF1	P21675	1872 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	OSTN	P61366	133 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	RPS6	P62753	249 aa	Known RBP	15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	CCNA1	P78396	465 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	TDRD12	Q587J7	1177 aa	Known RBP	15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	LRSAM1	Q6UWE0	723 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	TSG101	Q99816	390 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	BHMT2	Q9H2M3	363 aa		15.16	■□□□□ 0.02
DDR1-225	ENST00000376568	BACE1	P56817	501 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	ADAL	Q6DHV7	355 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	FAM160B2	Q86V87	743 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	DCAF4	Q8WV16	495 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	FOXP1	Q9H334	677 aa	Predicted RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	MRPL44	Q9H9J2	332 aa	Known RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	EFCC1	Q9HA90	598 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	IFNK	Q9P0W0	207 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	RGPD1	P0DJD0	1748 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	LRRIQ4	A6NIV6	560 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568		B4DLN1	442 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568		E9PMD0	336 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	KIF20A	O95235	890 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	UBASH3A	P57075	661 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	KIF22	Q14807	665 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	POSTN	Q15063	836 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	P2RX7	Q99572	595 aa	Known RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	CRACR2A	Q9BSW2	395 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	TMEM60	Q9H2L4	133 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	TAF1D	Q9H5J8	278 aa	Predicted RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	NYAP2	Q9P242	653 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	RPAP1	Q9BWH6	1393 aa	Predicted RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	POTEB3	A0JP26	581 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	POTEC	B2RU33	542 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	XRCC6	P12956	609 aa	Known RBP eCLIP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	HIRA	P54198	1017 aa	Predicted RBP	15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	POTEB	Q6S5H4	581 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	TAAR1	Q96RJ0	339 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	PLCH1	Q4KWH8	1693 aa		15.15	■□□□□ 0.02
DDR1-225	ENST00000376568	COL18A1	P39060	1754 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	POTEF	A5A3E0	1075 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	PSMA7	O14818	248 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	CYP2J2	P51589	502 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	TYW1B	Q6NUM6	668 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	POTEG	Q6S5H5	508 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	POTEE	Q6S8J3	1075 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	FEM1B	Q9UK73	627 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	DDX52	Q9Y2R4	599 aa	Known RBP eCLIP	15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	SMTNL1	A8MU46	457 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	YEATS4	O95619	227 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	JAG1	P78504	1218 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	C7orf43	Q8WVR3	580 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	HNRNPUL1	Q9BUJ2	856 aa	Known RBP eCLIP	15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	GAK	O14976	1311 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	CNTNAP5	Q8WYK1	1306 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	CTAGE5	O15320	804 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	LRMP	Q12912	555 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	SNAPC2	Q13487	334 aa		15.14	■□□□□ 0.01
DDR1-225	ENST00000376568	SCN11A	Q9UI33	1791 aa		15.13	■□□□□ 0.01
DDR1-225	ENST00000376568	PLCG1	P19174	1290 aa		15.13	■□□□□ 0.01
DDR1-225	ENST00000376568	SSR1	P43307	286 aa	Known RBP	15.13	■□□□□ 0.01
DDR1-225	ENST00000376568	MTMR1	Q13613	665 aa		15.13	■□□□□ 0.01
DDR1-225	ENST00000376568	FAM163A	Q96GL9	167 aa	Predicted RBP	15.13	■□□□□ 0.01
DDR1-225	ENST00000376568	IDI2	Q9BXS1	227 aa		15.13	■□□□□ 0.01

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