RNA–Protein interactions for RNA: ENST00000375851.6

C9orf47-203, Transcript of chromosome 9 open reading frame 47, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene C9orf47, Length 4,837 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf47-203ENST00000375851 PLEKHA4Q9H4M7 779 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 DDX41Q9UJV9 622 aaKnown RBP14.99□□□□□ -0.01
C9orf47-203ENST00000375851 COL15A1P39059 1388 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 BUB1O43683 1085 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 NR2F2P24468 414 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 ARL1P40616 181 aaPredicted RBP14.99□□□□□ -0.01
C9orf47-203ENST00000375851 CDC25BP30305 580 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 EXOC3L4Q17RC7 722 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 ZNF658Q5TYW1 1059 aaPredicted RBP14.99□□□□□ -0.01
C9orf47-203ENST00000375851 DPY19L2Q6NUT2 758 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 RUFY4Q6ZNE9 571 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 PPM1KQ8N3J5 372 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 STK17AQ9UEE5 414 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 HYOU1Q9Y4L1 999 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 CRB1P82279 1406 aa14.99□□□□□ -0.01
C9orf47-203ENST00000375851 N4BP1O75113 896 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 NT5C2P49902 561 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 FKBP3Q00688 224 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC6Q16204 474 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 TMTC3Q6ZXV5 915 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CYB5R4Q7L1T6 521 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 SAMSN1Q9NSI8 373 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 TRPC6Q9Y210 931 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 NRKQ7Z2Y5 1582 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 E7EVH7 732 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 KCNK3O14649 394 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 PRPF6O94906 941 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 DLATP10515 647 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA8FQ08AF8 430 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 GOLGA8DPQ0D2H9 430 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CEP128Q6ZU80 1094 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 ZBTB8OSQ8IWT0 167 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 MICALL1Q8N3F8 863 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 SH3RF3Q8TEJ3 882 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 LAMC1P11047 1609 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CEP152O94986 1710 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 VIMP08670 466 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 TCP1P17987 556 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 RABL6Q3YEC7 729 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 GADL1Q6ZQY3 521 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 MRRFQ96E11 262 aaKnown RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 ZNF577Q9BSK1 485 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 ZMYND15Q9H091 742 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 NEDD4P46934 1319 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 H0YCG3 227 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 NDUFAB1O14561 156 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 ATP5DP30049 168 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CACNB1Q02641 598 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC14Q49A88 953 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 TBC1D9BQ66K14 1250 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 FOXP4Q8IVH2 680 aaPredicted RBP14.98□□□□□ -0.01
C9orf47-203ENST00000375851 RNF34Q969K3 372 aa14.98□□□□□ -0.01
C9orf47-203ENST00000375851 KCNQ2O43526 872 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 MYL1P05976 194 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 SCARF1Q14162 830 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 CLUL1Q15846 466 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 PTPROQ16827 1216 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 LONRF2Q1L5Z9 754 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 NCAPG2Q86XI2 1143 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 MB21D2Q8IYB1 491 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-203ENST00000375851 DMP1Q13316 513 aaPredicted RBP14.97□□□□□ -0.01
C9orf47-203ENST00000375851 CD209Q9NNX6 404 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 C1orf112Q9NSG2 853 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 LRRIQ4A6NIV6 560 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 BRD3Q15059 726 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 WDR11Q9BZH6 1224 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 RIC8AQ9NPQ8 531 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 RFX7Q2KHR2 1363 aa14.97□□□□□ -0.01
C9orf47-203ENST00000375851 STAT2P52630 851 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 UBE2SQ16763 222 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 CCDC93Q567U6 631 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 ARL6IP4Q66PJ3 421 aaKnown RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 DCPSQ96C86 337 aaKnown RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 ST7Q9NRC1 585 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 GAS8O95995 478 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 PLCG1P19174 1290 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 CALRP27797 417 aaKnown RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 ARHGEF1Q92888 912 aaKnown RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 DCP1AQ9NPI6 582 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 FEZ2Q9UHY8 353 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 EFCAB8A8MWE9 144 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 DAPK3O43293 454 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 PTPREP23469 700 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 PTPRMP28827 1452 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 POLGP54098 1239 aaPredicted RBP14.96□□□□□ -0.01
C9orf47-203ENST00000375851 SYDE2Q5VT97 1194 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 PAGE5Q96GU1 130 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 MASTLQ96GX5 879 aa14.96□□□□□ -0.01
C9orf47-203ENST00000375851 RBL2Q08999 1139 aa14.96□□□□□ -0.02
C9orf47-203ENST00000375851 ALX1Q15699 326 aa14.96□□□□□ -0.02
C9orf47-203ENST00000375851 PPP1R21Q6ZMI0 780 aa14.96□□□□□ -0.02
C9orf47-203ENST00000375851 ATG9AQ7Z3C6 839 aa14.96□□□□□ -0.02
C9orf47-203ENST00000375851 SMC6Q96SB8 1091 aa14.96□□□□□ -0.02
C9orf47-203ENST00000375851 PNMA6FA0A0J9YX94 578 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 PPP1R13BQ96KQ4 1090 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 CPDO75976 1380 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 MEIS1O00470 390 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 CCNE1P24864 410 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 CACNB3P54284 484 aa14.95□□□□□ -0.02
C9orf47-203ENST00000375851 YWHAEP62258 255 aaKnown RBP14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms