RNA–Protein interactions for RNA: ENST00000375750.7

MSH5-203, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 2,775 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-203ENST00000375750 ZNF219Q9P2Y4 722 aaPredicted RBP16.97■□□□□ 0.31
MSH5-203ENST00000375750 LGALS16A8MUM7 142 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 PSMD14O00487 310 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 BMP15O95972 392 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 GGCXP38435 758 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 SPAG1Q07617 926 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 DOK7Q18PE1 504 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 C2CD5Q86YS7 1000 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 HDAC7Q8WUI4 952 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 EHD4Q9H223 541 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 MYO1AQ9UBC5 1043 aa16.97■□□□□ 0.31
MSH5-203ENST00000375750 ZC3H4Q9UPT8 1303 aaKnown RBP16.96■□□□□ 0.31
MSH5-203ENST00000375750 DPP8Q6V1X1 898 aaPredicted RBP16.96■□□□□ 0.31
MSH5-203ENST00000375750 DEFB132Q7Z7B7 95 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 CAGE1Q8TC20 777 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 PCMTD1Q96MG8 357 aaPredicted RBP16.96■□□□□ 0.31
MSH5-203ENST00000375750 DNAJC7Q99615 494 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 MTA3Q9BTC8 594 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 GBP3Q9H0R5 595 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 STK32BQ9NY57 414 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 EHD2Q9NZN4 543 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 NRXN2Q9P2S2 1712 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 H7C1D1 291 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 KLRC4O43908 158 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 PRPF6O94906 941 aaKnown RBP16.96■□□□□ 0.31
MSH5-203ENST00000375750 CHRNA5P30532 468 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 TGFBRAP1Q8WUH2 860 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 ZC3H12CQ9C0D7 883 aaKnown RBP16.96■□□□□ 0.31
MSH5-203ENST00000375750 CPVLQ9H3G5 476 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 DISC1Q9NRI5 854 aa16.96■□□□□ 0.31
MSH5-203ENST00000375750 CCDC88AQ3V6T2 1871 aa16.96■□□□□ 0.3
MSH5-203ENST00000375750 GSTO1P78417 241 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 INF2Q27J81 1249 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 CERS3Q8IU89 383 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 DUSP9Q99956 384 aaKnown RBP16.95■□□□□ 0.3
MSH5-203ENST00000375750 HAUS4Q9H6D7 363 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 NHEJ1Q9H9Q4 299 aaPredicted RBP16.95■□□□□ 0.3
MSH5-203ENST00000375750 JADE2Q9NQC1 790 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 CAPN11Q9UMQ6 739 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 MATR3P43243 847 aaKnown RBP eCLIP16.95■□□□□ 0.3
MSH5-203ENST00000375750 TRIM14Q14142 442 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 PFKFB3Q16875 520 aaPredicted RBP16.95■□□□□ 0.3
MSH5-203ENST00000375750 MXD3Q9BW11 206 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 RTFDC1Q9BY42 306 aaPredicted RBP16.95■□□□□ 0.3
MSH5-203ENST00000375750 DUOX1Q9NRD9 1551 aa16.95■□□□□ 0.3
MSH5-203ENST00000375750 ZNF263O14978 683 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 BAG3O95817 575 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 TRIM21P19474 475 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 TTC19Q6DKK2 380 aaPredicted RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 RRP36Q96EU6 259 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 TSPYL1Q9H0U9 437 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 MKRN1Q9UHC7 482 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 EIF3CLB5ME19 914 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 F8W031 263 aaPredicted RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 AGPSO00116 658 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 FGRP09769 529 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 FCER1AP12319 257 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 BTDP43251 543 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 SLC7A5Q01650 507 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 STIM1Q13586 685 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 PPP2R5BQ15173 497 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 TSR1Q2NL82 804 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 BLIDQ8IZY5 108 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 AFAP1L1Q8TED9 768 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 EIF3CQ99613 913 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 TUBGCP2Q9BSJ2 902 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 MLXIPQ9HAP2 919 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 H0YIN7 160 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 IDEP14735 1019 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 CXCR5P32302 372 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 SLC35G1Q2M3R5 365 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 PAPD7Q5XG87 772 aaKnown RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 POLD4Q9HCU8 107 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 RMND1Q9NWS8 449 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 ARPP21Q9UBL0 812 aaPredicted RBP16.94■□□□□ 0.3
MSH5-203ENST00000375750 LRWD1Q9UFC0 647 aa16.94■□□□□ 0.3
MSH5-203ENST00000375750 DDAH1O94760 285 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 IVLP07476 585 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 LDHCP07864 332 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 TBC1D8BQ0IIM8 1120 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 ANKRD40Q6AI12 368 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 RCSD1Q6JBY9 416 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 TTI2Q6NXR4 508 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 TMED8Q6PL24 325 aaPredicted RBP16.93■□□□□ 0.3
MSH5-203ENST00000375750 MAPKAPK5Q8IW41 473 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 CSGALNACT2Q8N6G5 542 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 DYNLL2Q96FJ2 89 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 SELENOOQ9BVL4 669 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 COA1Q9GZY4 146 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 TMX4Q9H1E5 349 aaPredicted RBP16.93■□□□□ 0.3
MSH5-203ENST00000375750 TSPY2A6NKD2 308 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 PPP4CP60510 307 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 ATP2B2Q01814 1243 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 STK4Q13043 487 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 SBK1Q52WX2 424 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 PACS2Q86VP3 889 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 COG1Q8WTW3 980 aa16.93■□□□□ 0.3
MSH5-203ENST00000375750 SAP30BPQ9UHR5 308 aaKnown RBP16.93■□□□□ 0.3
MSH5-203ENST00000375750 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.93■□□□□ 0.3
MSH5-203ENST00000375750 LTBP1Q14766 1721 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms