RNA–Protein interactions for RNA: ENST00000374949.2

HLA-DQA1-202, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,060 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-202ENST00000374949 WTAPQ15007 396 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SYNE3Q6ZMZ3 975 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ANKRD33Q7Z3H0 272 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SGMS1Q86VZ5 419 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ZKSCAN3Q9BRR0 538 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 LY9Q9HBG7 655 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 BRPF3Q9ULD4 1205 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SMC3Q9UQE7 1217 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 RIPK3Q9Y572 518 aa12.7□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SYNGAP1Q96PV0 1343 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TSPY2A6NKD2 308 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DCDC2CA8MYV0 355 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ADCY6O43306 1168 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SNAI1O95863 264 aaPredicted RBP12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NDUFB10O96000 172 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 KCNA10Q16322 511 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GTF3C6Q969F1 213 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 BUD13Q9BRD0 619 aaKnown RBP eCLIP12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 LLPHQ9BRT6 129 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TSEN34Q9BSV6 310 aaKnown RBP12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TCP11L1Q9NUJ3 509 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TBX21Q9UL17 535 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 FAM184BQ9ULE4 1060 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GBF1Q92538 1859 aa12.69□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MOXD2PA6NHM9 499 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DHX16O60231 1041 aaKnown RBP12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 C6orf222P0C671 652 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TSPY3P0CV98 308 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TSPY8P0CW00 308 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 RASA1P20936 1047 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CCT2P78371 535 aaKnown RBP12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NUCB2P80303 420 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SCRN1Q12765 414 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SEC23AQ15436 765 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CCSAPQ6IQ19 270 aaPredicted RBP12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CPXCR1Q8N123 301 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 KLHDC9Q8NEP7 349 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NUP133Q8WUM0 1156 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 FGD4Q96M96 766 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TOX2Q96NM4 488 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PRDM6Q9NQX0 595 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SLC12A7Q9Y666 1083 aa12.68□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TNKSO95271 1327 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DNAJC25-GNG10A0A024R161 153 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GRXCR1A8MXD5 290 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ZBTB43O43298 467 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TIMP1P01033 207 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PBX2P40425 430 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ST3GAL1Q11201 340 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 IFIT1BQ5T764 474 aaKnown RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MAMDC4Q6UXC1 1216 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MSL3Q8N5Y2 521 aaKnown RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 NEDD1Q8NHV4 660 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ANKS1AQ92625 1134 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 KIFC2Q96AC6 838 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TIFAQ96CG3 184 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GLT1D1Q96MS3 346 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PPP1R12CQ9BZL4 782 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ZNF576Q9H609 170 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 SENP2Q9HC62 589 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 RAVER2Q9HCJ3 691 aaKnown RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MYO9BQ13459 2157 aa12.67□□□□□ -0.38
HLA-DQA1-202ENST00000374949 F5H6K3 240 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DUSP11O75319 330 aaKnown RBP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ASGR1P07306 291 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PDIA4P13667 645 aaKnown RBP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CSF2RAP15509 400 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CST5P28325 142 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 GJB2P29033 226 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 METAP2P50579 478 aaKnown RBP eCLIP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 KLRC3Q07444 240 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ACVR2BQ13705 512 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 APOA5Q6Q788 366 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 C16orf59Q7L2K0 433 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CATIPQ7Z7H3 387 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 DGKHQ86XP1 1220 aa12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 LRRC47Q8N1G4 583 aaKnown RBP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ENAHQ8N8S7 591 aaPredicted RBP12.66□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ELP1O95163 1332 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MROH7Q68CQ1 1323 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 A0A0U1RQG5 324 aaPredicted RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CALM1P0DP23 149 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CALM2P0DP24 149 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CALM3P0DP25 149 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ACRP10323 421 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 RCAN1P53805 252 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PPIGQ13427 754 aaKnown RBP eCLIP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 PPP2R5BQ15173 497 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CCDC144BQ3MJ40 725 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TJAP1Q5JTD0 557 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 TMEM240Q5SV17 173 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 MFSD5Q6N075 450 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 CPLX2Q6PUV4 134 aaKnown RBP12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ARMCX2Q7L311 632 aa12.65□□□□□ -0.38
HLA-DQA1-202ENST00000374949 ZNF467Q7Z7K2 595 aaPredicted RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms