RNA–Protein interactions for RNA: ENST00000374607.5

PFDN6-202, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PFDN6, Length 598 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-202ENST00000374607 RPS6P62753 249 aaKnown RBP17.54■□□□□ 0.4
PFDN6-202ENST00000374607 FUT2Q10981 343 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 NTRK3Q16288 839 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 PFKFB3Q16875 520 aaPredicted RBP17.54■□□□□ 0.4
PFDN6-202ENST00000374607 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.54■□□□□ 0.4
PFDN6-202ENST00000374607 RGS22Q8NE09 1264 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 SH3TC2Q8TF17 1288 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 WASF1Q92558 559 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 USP6NLQ92738 828 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 PSTPIP2Q9H939 334 aa17.54■□□□□ 0.4
PFDN6-202ENST00000374607 DIS3Q9Y2L1 958 aaKnown RBP17.54■□□□□ 0.4
PFDN6-202ENST00000374607 CCDC85CA6NKD9 419 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 MYCP01106 439 aaPredicted RBP17.53■□□□□ 0.4
PFDN6-202ENST00000374607 HMGCRP04035 888 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 HOXC6P09630 235 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 CNTN2Q02246 1040 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 CCL14Q16627 93 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 ZNF792Q3KQV3 632 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 WWC2Q6AWC2 1192 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 SLC30A10Q6XR72 485 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 SAMD3Q8N6K7 520 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 MAML3Q96JK9 1138 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 MAF1Q9H063 256 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 BARHL2Q9NY43 387 aa17.53■□□□□ 0.4
PFDN6-202ENST00000374607 MAP3K20Q9NYL2 800 aaKnown RBP17.53■□□□□ 0.4
PFDN6-202ENST00000374607 BAZ2BQ9UIF8 2168 aaKnown RBP17.53■□□□□ 0.4
PFDN6-202ENST00000374607 ASB14A6NK59 587 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 HOXA13P31271 388 aaPredicted RBP17.52■□□□□ 0.4
PFDN6-202ENST00000374607 ARHGEF16Q5VV41 709 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 PPP1R18Q6NYC8 613 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 FCHSD1Q86WN1 690 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 CCDC148Q8NFR7 591 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 GLT8D2Q9H1C3 349 aa17.52■□□□□ 0.4
PFDN6-202ENST00000374607 ORC3Q9UBD5 711 aaPredicted RBP17.52■□□□□ 0.4
PFDN6-202ENST00000374607 DNAJC25-GNG10A0A024R161 153 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 SMCO2A6NFE2 343 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 STXBP3O00186 592 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 INHAP05111 366 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 ADCY7P51828 1080 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 NLRP5P59047 1200 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 OLFML2BQ68BL8 750 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 FAM184AQ8NB25 1140 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 TRIB2Q92519 343 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 TBC1D5Q92609 795 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 C6orf50Q9HD87 102 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 CNPY2Q9Y2B0 182 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 ZNF236Q9UL36 1845 aa17.51■□□□□ 0.39
PFDN6-202ENST00000374607 ZNFX1Q9P2E3 1918 aaKnown RBP17.51■□□□□ 0.39
PFDN6-202ENST00000374607 SPDYE3A6NKU9 549 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 CNGA1P29973 690 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 GNA11P29992 359 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 CYP2C19P33261 490 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 PDE4DQ08499 809 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 TRIM29Q14134 588 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 ZNF467Q7Z7K2 595 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-202ENST00000374607 HSCBQ8IWL3 235 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 MSL3Q8N5Y2 521 aaKnown RBP17.5■□□□□ 0.39
PFDN6-202ENST00000374607 FAM133AQ8N9E0 248 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 DNERQ8NFT8 737 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 BICD2Q8TD16 824 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 SYTL5Q8TDW5 730 aaPredicted RBP17.5■□□□□ 0.39
PFDN6-202ENST00000374607 NSUN6Q8TEA1 469 aaKnown RBP17.5■□□□□ 0.39
PFDN6-202ENST00000374607 TMX3Q96JJ7 454 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 RMDN3Q96TC7 470 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 LLPHQ9BRT6 129 aaKnown RBP17.5■□□□□ 0.39
PFDN6-202ENST00000374607 TINF2Q9BSI4 451 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 EHMT1Q9H9B1 1298 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 FLRT1Q9NZU1 646 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 VPS54Q9P1Q0 977 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 DOCK3Q8IZD9 2030 aa17.5■□□□□ 0.39
PFDN6-202ENST00000374607 STK36Q9NRP7 1315 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 PRKAR2AP13861 404 aaKnown RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 ALDH5A1P51649 535 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 HSD17B4P51659 736 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 HMGN5P82970 282 aaKnown RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 PKN1Q16512 942 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 NSUN7Q8NE18 718 aaKnown RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 PURBQ96QR8 312 aaKnown RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 TAAR1Q96RJ0 339 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 ALG1Q9BT22 464 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 HMX1Q9NP08 348 aaPredicted RBP17.49■□□□□ 0.39
PFDN6-202ENST00000374607 SH3GLB2Q9NR46 395 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 KIF3AQ9Y496 699 aa17.49■□□□□ 0.39
PFDN6-202ENST00000374607 RBBP6Q7Z6E9 1792 aaKnown RBP17.48■□□□□ 0.39
PFDN6-202ENST00000374607 SOWAHBA6NEL2 793 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 DTNBO60941 627 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 CD2BP2O95400 341 aaKnown RBP17.48■□□□□ 0.39
PFDN6-202ENST00000374607 USP17L6PQ6QN14 398 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 ARMCX2Q7L311 632 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 TMEM106CQ9BVX2 250 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 RIC8AQ9NPQ8 531 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 ZHX1Q9UKY1 873 aaPredicted RBP17.48■□□□□ 0.39
PFDN6-202ENST00000374607 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.48■□□□□ 0.39
PFDN6-202ENST00000374607 SMCHD1A6NHR9 2005 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 PLXNA1Q9UIW2 1896 aa17.48■□□□□ 0.39
PFDN6-202ENST00000374607 SYNGAP1Q96PV0 1343 aa17.47■□□□□ 0.39
PFDN6-202ENST00000374607 OPLAHO14841 1288 aa17.47■□□□□ 0.39
PFDN6-202ENST00000374607 JAK2O60674 1132 aa17.47■□□□□ 0.39
PFDN6-202ENST00000374607 CTDNEP1O95476 244 aa17.47■□□□□ 0.39
PFDN6-202ENST00000374607 HSP90AA1P07900 732 aaKnown RBP17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms