RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 CYTH3O43739 400 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 KIF20AO95235 890 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 NOVP48745 357 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 AMPD3Q01432 767 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 NAALADL2Q58DX5 795 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 MFSD14BQ5SR56 506 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 TYW1BQ6NUM6 668 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 RSRC2Q7L4I2 434 aaKnown RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 RASGRP4Q8TDF6 673 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 CPLX3Q8WVH0 158 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 NUP88Q99567 741 aaPredicted RBP15.65■□□□□ 0.1
HMGCL-203ENST00000374490 ZNF446Q9NWS9 450 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 STX8Q9UNK0 236 aa15.65■□□□□ 0.1
HMGCL-203ENST00000374490 SLX4Q8IY92 1834 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 GAKO14976 1311 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 PLIN4Q96Q06 1357 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 ADAMTS3O15072 1205 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 FXR1P51114 621 aaKnown RBP eCLIP15.64■□□□□ 0.09
HMGCL-203ENST00000374490 MTF1Q14872 753 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 SLC35G1Q2M3R5 365 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 COBLL1Q53SF7 1204 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 CABP7Q86V35 215 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 GIMAP8Q8ND71 665 aaPredicted RBP15.64■□□□□ 0.09
HMGCL-203ENST00000374490 IQCDQ96DY2 449 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 VPS16Q9H269 839 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 TMEM60Q9H2L4 133 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 GDAQ9Y2T3 454 aa15.64■□□□□ 0.09
HMGCL-203ENST00000374490 KLRC4O43908 158 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 ZRANB2O95218 330 aaKnown RBP eCLIP15.63■□□□□ 0.09
HMGCL-203ENST00000374490 COL13A1Q5TAT6 717 aaPredicted RBP15.63■□□□□ 0.09
HMGCL-203ENST00000374490 NEK8Q86SG6 692 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 MB21D1Q8N884 522 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 NUP58Q9BVL2 599 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 SAP30BPQ9UHR5 308 aaKnown RBP15.63■□□□□ 0.09
HMGCL-203ENST00000374490 CDC23Q9UJX2 597 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 PRDM4Q9UKN5 801 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 FLT1P17948 1338 aa15.63■□□□□ 0.09
HMGCL-203ENST00000374490 CTAGE9A4FU28 777 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 SMCO2A6NFE2 343 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 POTECB2RU33 542 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 GTF2IP78347 998 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 UBXN1Q04323 297 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 TSR1Q2NL82 804 aaKnown RBP15.62■□□□□ 0.09
HMGCL-203ENST00000374490 SLC4A8Q2Y0W8 1093 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 CC2D2BQ6DHV5 1058 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 SRGAP1Q7Z6B7 1085 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 RETREG2Q8NC44 543 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 SLC44A5Q8NCS7 719 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 TRIM47Q96LD4 638 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 C7orf25Q9BPX7 421 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 LZTFL1Q9NQ48 299 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 SUGT1Q9Y2Z0 365 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 FHOD1Q9Y613 1164 aa15.62■□□□□ 0.09
HMGCL-203ENST00000374490 PNMA6AP0CW24 399 aaPredicted RBP15.61■□□□□ 0.09
HMGCL-203ENST00000374490 KRT9P35527 623 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 DNM2P50570 870 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 GRIK5Q16478 980 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 TEX35Q5T0J7 233 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 PPP1R18Q6NYC8 613 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 OR8K1Q8NGG5 319 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 CALML4Q96GE6 196 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 EXOC1Q9NV70 894 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 SBF1O95248 1867 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 IQCA1LA6NCM1 817 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 TUBBP07437 444 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 CCNE1P24864 410 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 RHBDL3P58872 404 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 ERVK-24P63145 666 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 BRD3Q15059 726 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 WHAMMP3Q1A5X7 153 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 ASPRV1Q53RT3 343 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 ZNF569Q5MCW4 686 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 CHADLQ6NUI6 762 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 TNS4Q8IZW8 715 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 NAPGQ99747 312 aaPredicted RBP15.61■□□□□ 0.09
HMGCL-203ENST00000374490 RIOX1Q9H6W3 641 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 STK17AQ9UEE5 414 aa15.61■□□□□ 0.09
HMGCL-203ENST00000374490 MYO3BQ8WXR4 1341 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 DDNO94850 711 aaPredicted RBP15.6■□□□□ 0.09
HMGCL-203ENST00000374490 PLCG1P19174 1290 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 CHMP4BP1P59074 171 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 DOK7Q18PE1 504 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 KIF4BQ2VIQ3 1234 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 TTI2Q6NXR4 508 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 CNNM4Q6P4Q7 775 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 IRF2BP1Q8IU81 584 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 REXO1Q8N1G1 1221 aaKnown RBP15.6■□□□□ 0.09
HMGCL-203ENST00000374490 SUPT20HQ8NEM7 779 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 P2RX5Q93086 422 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 DNAJC7Q99615 494 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 LRRC27Q9C0I9 530 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 CAPN11Q9UMQ6 739 aa15.6■□□□□ 0.09
HMGCL-203ENST00000374490 LUC7L2Q9Y383 392 aaKnown RBP15.6■□□□□ 0.09
HMGCL-203ENST00000374490 PP2D1A8MPX8 630 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 CCNT1O60563 726 aaKnown RBP15.59■□□□□ 0.09
HMGCL-203ENST00000374490 HSPA1AP0DMV8 641 aaKnown RBP15.59■□□□□ 0.09
HMGCL-203ENST00000374490 HSPA1BP0DMV9 641 aaKnown RBP15.59■□□□□ 0.09
HMGCL-203ENST00000374490 CDC25AP30304 524 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 TMEM266Q2M3C6 531 aa15.59■□□□□ 0.09
HMGCL-203ENST00000374490 LETM2Q2VYF4 491 aa15.59■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms