RNA–Protein interactions for RNA: ENST00000374180.3

HDHD3-202, Transcript of haloacid dehalogenase like hydrolase domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDHD3, Length 1,497 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3-202ENST00000374180 PRAMEF19Q5SWL8 479 aa18.46■□□□□ 0.55
HDHD3-202ENST00000374180 PURBQ96QR8 312 aaKnown RBP18.46■□□□□ 0.55
HDHD3-202ENST00000374180 PAK6Q9NQU5 681 aaPredicted RBP18.46■□□□□ 0.55
HDHD3-202ENST00000374180 ADD3Q9UEY8 706 aaKnown RBP18.46■□□□□ 0.55
HDHD3-202ENST00000374180 NID2Q14112 1375 aa18.46■□□□□ 0.55
HDHD3-202ENST00000374180 CNTNAP5Q8WYK1 1306 aa18.46■□□□□ 0.55
HDHD3-202ENST00000374180 SYNGAP1Q96PV0 1343 aa18.46■□□□□ 0.55
HDHD3-202ENST00000374180 POTEFA5A3E0 1075 aa18.46■□□□□ 0.54
HDHD3-202ENST00000374180 CNGA1P29973 690 aa18.46■□□□□ 0.54
HDHD3-202ENST00000374180 STK3Q13188 491 aa18.46■□□□□ 0.54
HDHD3-202ENST00000374180 DEFB118Q96PH6 123 aa18.46■□□□□ 0.54
HDHD3-202ENST00000374180 NCOA5Q9HCD5 579 aaKnown RBP18.46■□□□□ 0.54
HDHD3-202ENST00000374180 CNPY2Q9Y2B0 182 aa18.46■□□□□ 0.54
HDHD3-202ENST00000374180 ASB14A6NK59 587 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 OPLAHO14841 1288 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 SNAI1O95863 264 aaPredicted RBP18.45■□□□□ 0.54
HDHD3-202ENST00000374180 CYBAP13498 195 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 IFFO2Q5TF58 517 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 TRPV1Q8NER1 839 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 SYTL5Q8TDW5 730 aaPredicted RBP18.45■□□□□ 0.54
HDHD3-202ENST00000374180 KIF2CQ99661 725 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 BACH2Q9BYV9 841 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 MAP3K20Q9NYL2 800 aaKnown RBP18.45■□□□□ 0.54
HDHD3-202ENST00000374180 NRBP1Q9UHY1 535 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 TPCN1Q9ULQ1 816 aa18.45■□□□□ 0.54
HDHD3-202ENST00000374180 PLXNA1Q9UIW2 1896 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 GJA8P48165 433 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 ARMCX2Q7L311 632 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 HEATR3Q7Z4Q2 680 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 SAMD3Q8N6K7 520 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 DNERQ8NFT8 737 aa18.44■□□□□ 0.54
HDHD3-202ENST00000374180 U2AF1L4Q8WU68 220 aaKnown RBP18.44■□□□□ 0.54
HDHD3-202ENST00000374180 CDKN2AIPQ9NXV6 580 aaPredicted RBP18.44■□□□□ 0.54
HDHD3-202ENST00000374180 ASTN1O14525 1302 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 GCOM1H8Y6P7 765 aaPredicted RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 CPLX1O14810 134 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 SGPL1O95470 568 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 POLR2MP0CAP2 368 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 EN2P19622 333 aaPredicted RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 ALDH5A1P51649 535 aaPredicted RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 HSD17B4P51659 736 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 AKAP17AQ02040 695 aaKnown RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 NOL8Q76FK4 1167 aaKnown RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 MPHOSPH6Q99547 160 aaKnown RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 SLKQ9H2G2 1235 aaPredicted RBP18.43■□□□□ 0.54
HDHD3-202ENST00000374180 ABHD16BQ9H3Z7 469 aa18.43■□□□□ 0.54
HDHD3-202ENST00000374180 LOC102724159A0A0B4J2E5 919 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 B4DLN1 442 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 TFRCP02786 760 aaKnown RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 IFNAR1P17181 557 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 HOXA13P31271 388 aaPredicted RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 MRPL12P52815 198 aaKnown RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 GHRHRQ02643 423 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 PWP2Q15269 919 aaKnown RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 NTRK3Q16288 839 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 CPLX2Q6PUV4 134 aaKnown RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 GPKOWQ92917 476 aaPredicted RBP eCLIP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 PHKBQ93100 1093 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 TAAR1Q96RJ0 339 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 COL20A1Q9P218 1284 aa18.42■□□□□ 0.54
HDHD3-202ENST00000374180 RBM27Q9P2N5 1060 aaKnown RBP18.42■□□□□ 0.54
HDHD3-202ENST00000374180 SEPT4O43236 478 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 PRPF3O43395 683 aaKnown RBP18.41■□□□□ 0.54
HDHD3-202ENST00000374180 MSCO60682 206 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 ACVR2BQ13705 512 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 NSUN6Q8TEA1 469 aaKnown RBP18.41■□□□□ 0.54
HDHD3-202ENST00000374180 CUL5Q93034 780 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 TBC1D32Q96NH3 1257 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 RMDN3Q96TC7 470 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 SLC26A6Q9BXS9 759 aa18.41■□□□□ 0.54
HDHD3-202ENST00000374180 DDX20Q9UHI6 824 aaKnown RBP18.41■□□□□ 0.54
HDHD3-202ENST00000374180 ZHX1Q9UKY1 873 aaPredicted RBP18.41■□□□□ 0.54
HDHD3-202ENST00000374180 DDX49Q9Y6V7 483 aaKnown RBP18.41■□□□□ 0.54
HDHD3-202ENST00000374180 PFKFB2O60825 505 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 PPFIA3O75145 1194 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 ZNF865P0CJ78 1059 aaPredicted RBP18.4■□□□□ 0.54
HDHD3-202ENST00000374180 CAPN2P17655 700 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 SCRN1Q12765 414 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 RABEP1Q15276 862 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 ARHGEF16Q5VV41 709 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 WWC2Q6AWC2 1192 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 MORC4Q8TE76 937 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 RNF26Q9BY78 433 aaPredicted RBP18.4■□□□□ 0.54
HDHD3-202ENST00000374180 PSTPIP2Q9H939 334 aa18.4■□□□□ 0.54
HDHD3-202ENST00000374180 hCG_1984214I3L0E3 225 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 SCG2P13521 617 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 NAPAP54920 295 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 PDE4DQ08499 809 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 SSRP1Q08945 709 aaKnown RBP18.39■□□□□ 0.54
HDHD3-202ENST00000374180 ME3Q16798 604 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 PFKFB3Q16875 520 aaPredicted RBP18.39■□□□□ 0.54
HDHD3-202ENST00000374180 LHX8Q68G74 356 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 EEPD1Q7L9B9 569 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 FCHSD1Q86WN1 690 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 TRIM22Q8IYM9 498 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 ZNF713Q8N859 430 aaPredicted RBP18.39■□□□□ 0.54
HDHD3-202ENST00000374180 SMARCC2Q8TAQ2 1214 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 CRISPLD2Q9H0B8 497 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 BARHL2Q9NY43 387 aa18.39■□□□□ 0.54
HDHD3-202ENST00000374180 FAM184BQ9ULE4 1060 aa18.39■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms