RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 GREB1LQ9C091 1923 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 TNS1Q9HBL0 1735 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 CCNT1O60563 726 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 FDX1P10109 184 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 CCZ1BP86790 482 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 CCZ1P86791 482 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 TBX2Q13207 712 aaPredicted RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 VARS2Q5ST30 1063 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 HYIQ5T013 277 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 RBM26Q5T8P6 1007 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 NYAP1Q6ZVC0 841 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 SV2BQ7L1I2 683 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 TMC6Q7Z403 805 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 CABP7Q86V35 215 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 PPFIBP1Q86W92 1011 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 CCAR2Q8N163 923 aaKnown RBP9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 TXLNBQ8N3L3 684 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 ERMNQ8TAM6 284 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 FAM151AQ8WW52 585 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 SHISA4Q96DD7 197 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 MTMR9Q96QG7 549 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 AMNQ9BXJ7 453 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 HSD3B7Q9H2F3 369 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 PSTPIP2Q9H939 334 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 ARHGEF10LQ9HCE6 1279 aa9.8□□□□□ -0.84
SNRNP40-202ENST00000373720 USP17L5A8MUK1 530 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PPP1R3GB7ZBB8 358 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 UBE2Q2LH0YL09 131 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PIK3CDO00329 1044 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 VIL1P09327 827 aaKnown RBP9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 TNNT1P13805 278 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 AKR1B1P15121 316 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 BMP6P22004 513 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 RPS12P25398 132 aaKnown RBP9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 SLC1A4P43007 532 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 TNNI2P48788 182 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PICALMQ13492 652 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 CALCRLQ16602 461 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 INF2Q27J81 1249 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 ABCB5Q2M3G0 1257 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 EARS2Q5JPH6 523 aaKnown RBP9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 CEP135Q66GS9 1140 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 HAUS3Q68CZ6 603 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 USP17L2Q6R6M4 530 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 ADGRF4Q8IZF3 695 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 ADSSL1Q8N142 457 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PDILTQ8N807 584 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 SLC44A5Q8NCS7 719 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 TBCKQ8TEA7 893 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 CHURC1Q8WUH1 139 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 CDK5RAP3Q96JB5 506 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 FAM20AQ96MK3 541 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 MBOAT7Q96N66 472 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PIGSQ96S52 555 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PDCL3Q9H2J4 239 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 JMJD4Q9H9V9 463 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 GOPCQ9HD26 462 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 ZNHIT6Q9NWK9 470 aaKnown RBP9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 MYO1AQ9UBC5 1043 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 MAGEC2Q9UBF1 373 aaPredicted RBP9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 LRWD1Q9UFC0 647 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 JAG2Q9Y219 1238 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 PHLPP2Q6ZVD8 1323 aa9.79□□□□□ -0.84
SNRNP40-202ENST00000373720 AKR1B15C9JRZ8 316 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 SMIM22K7EJ46 135 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 CTIFO43310 598 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 GNA14O95837 355 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 FECHP22830 423 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 DNM2P50570 870 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 MAP3K10Q02779 954 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 GRIN1Q05586 938 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 LRRC63Q05C16 580 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 TNFAIP1Q13829 316 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 TSR1Q2NL82 804 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 LETM2Q2VYF4 491 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 CCDC144BQ3MJ40 725 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 FIGNQ5HY92 759 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 RSBN1LQ6PCB5 846 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 CCDC84Q86UT8 332 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 FAM160B2Q86V87 743 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 TMTC1Q8IUR5 882 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 GPKOWQ92917 476 aaPredicted RBP eCLIP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 FBXW7Q969H0 707 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 RNF166Q96A37 237 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 ZNF830Q96NB3 372 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 BAG1Q99933 345 aaPredicted RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 EDEM3Q9BZQ6 932 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 DEFB129Q9H1M3 183 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 ADD3Q9UEY8 706 aaKnown RBP9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 NRBP1Q9UHY1 535 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 PYCARDQ9ULZ3 195 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 PITPNM2Q9BZ72 1349 aa9.78□□□□□ -0.84
SNRNP40-202ENST00000373720 UQCRHLA0A096LP55 91 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 hCG_1642624A0A1W2PR95 340 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 MPHOSPH10O00566 681 aaKnown RBP9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 PPIP5K2O43314 1243 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 TUBBP07437 444 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 UQCRHP07919 91 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 CYP3A4P08684 503 aa9.77□□□□□ -0.85
SNRNP40-202ENST00000373720 CCNE1P24864 410 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms