RNA–Protein interactions for RNA: ENST00000373484.4

SYNC-201, Transcript of syncoilin, intermediate filament protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SYNC, Length 1,824 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNC-201ENST00000373484 NID2Q14112 1375 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 CENPFP49454 3210 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 SMARCA1P28370 1054 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 IRF5Q13568 498 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.49■■□□□ 1.35
SYNC-201ENST00000373484 ABRAQ8N0Z2 381 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 CHST13Q8NET6 341 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 LZTS2Q9BRK4 669 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 SPZ1Q9BXG8 430 aa23.49■■□□□ 1.35
SYNC-201ENST00000373484 PLEKHA8P1O95397 391 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 ALAS1P13196 640 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 QRICH1Q2TAL8 776 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 RAET1EQ8TD07 263 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 RBM28Q9NW13 759 aaKnown RBP23.48■■□□□ 1.35
SYNC-201ENST00000373484 FBXO40Q9UH90 709 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 USP25Q9UHP3 1055 aa23.48■■□□□ 1.35
SYNC-201ENST00000373484 GOLGA8AA7E2F4 631 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 GOLGA8BA8MQT2 603 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 FCER1AP12319 257 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 NOLC1Q14978 699 aaKnown RBP eCLIP23.47■■□□□ 1.35
SYNC-201ENST00000373484 RTN1Q16799 776 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 TMTC3Q6ZXV5 915 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 SRBD1Q8N5C6 995 aaKnown RBP23.47■■□□□ 1.35
SYNC-201ENST00000373484 HOMER2Q9NSB8 354 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 RNF146Q9NTX7 359 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 NAP1L2Q9ULW6 460 aaPredicted RBP23.47■■□□□ 1.35
SYNC-201ENST00000373484 HPS5Q9UPZ3 1129 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 ADCY5O95622 1261 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 TAL1P17542 331 aaPredicted RBP23.47■■□□□ 1.35
SYNC-201ENST00000373484 ADORA2AP29274 412 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 MAP2K5Q13163 448 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 NOL8Q76FK4 1167 aaKnown RBP23.47■■□□□ 1.35
SYNC-201ENST00000373484 TRERF1Q96PN7 1200 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 MMP19Q99542 508 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 ACAD9Q9H845 621 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 CNPY2Q9Y2B0 182 aa23.47■■□□□ 1.35
SYNC-201ENST00000373484 LCTP09848 1927 aa23.46■■□□□ 1.35
SYNC-201ENST00000373484 ZBTB5O15062 677 aa23.46■■□□□ 1.35
SYNC-201ENST00000373484 METAP2P50579 478 aaKnown RBP eCLIP23.46■■□□□ 1.35
SYNC-201ENST00000373484 PPP2R5BQ15173 497 aa23.46■■□□□ 1.35
SYNC-201ENST00000373484 FAM217BQ9NTX9 383 aaPredicted RBP23.46■■□□□ 1.35
SYNC-201ENST00000373484 XRCC5P13010 732 aaKnown RBP23.45■■□□□ 1.34
SYNC-201ENST00000373484 RGS2P41220 211 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 RBM10P98175 930 aaKnown RBP23.45■■□□□ 1.34
SYNC-201ENST00000373484 KCTD2Q14681 263 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 CMTR1Q8N1G2 835 aaKnown RBP23.45■■□□□ 1.34
SYNC-201ENST00000373484 PIGSQ96S52 555 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 GDPD2Q9HCC8 539 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 HOXC6P09630 235 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 CYP2B6P20813 491 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 PDIA3P30101 505 aaKnown RBP23.45■■□□□ 1.34
SYNC-201ENST00000373484 CDC27P30260 824 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 MUM1L1Q5H9M0 696 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 FBXO11Q86XK2 927 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 HOMER1Q86YM7 354 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 ZNF274Q96GC6 653 aaPredicted RBP23.45■■□□□ 1.34
SYNC-201ENST00000373484 APBA2Q99767 749 aa23.45■■□□□ 1.34
SYNC-201ENST00000373484 ELP1O95163 1332 aa23.44■■□□□ 1.34
SYNC-201ENST00000373484 ADCY3O60266 1144 aa23.44■■□□□ 1.34
SYNC-201ENST00000373484 USH1GQ495M9 461 aa23.44■■□□□ 1.34
SYNC-201ENST00000373484 SMAP1Q8IYB5 467 aaPredicted RBP23.44■■□□□ 1.34
SYNC-201ENST00000373484 PXYLP1Q8TE99 480 aa23.44■■□□□ 1.34
SYNC-201ENST00000373484 LARP6Q9BRS8 491 aaKnown RBP23.44■■□□□ 1.34
SYNC-201ENST00000373484 PNMA6FA0A0J9YX94 578 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 PPP1R11O60927 126 aaPredicted RBP23.43■■□□□ 1.34
SYNC-201ENST00000373484 COBLO75128 1261 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 ANKRD1Q15327 319 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 TNS4Q8IZW8 715 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 SLAIN1Q8ND83 568 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 AMNQ9BXJ7 453 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 MTMR6Q9Y217 621 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 ABCB11O95342 1321 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 CNTNAP5Q8WYK1 1306 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 CCDC196A0A1B0GTZ2 297 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 GOLGA6L6A8MZA4 724 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 GRK4P32298 578 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 FUT2Q10981 343 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 SLC9C1Q4G0N8 1177 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 DPP9Q86TI2 863 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 CLEC4DQ8WXI8 215 aa23.43■■□□□ 1.34
SYNC-201ENST00000373484 RRP36Q96EU6 259 aaKnown RBP23.43■■□□□ 1.34
SYNC-201ENST00000373484 PDCP20941 246 aa23.42■■□□□ 1.34
SYNC-201ENST00000373484 ADD1P35611 737 aaKnown RBP23.42■■□□□ 1.34
SYNC-201ENST00000373484 ANKRD35Q8N283 1001 aa23.42■■□□□ 1.34
SYNC-201ENST00000373484 CCDC82Q8N4S0 544 aa23.42■■□□□ 1.34
SYNC-201ENST00000373484 NPLOC4Q8TAT6 608 aa23.42■■□□□ 1.34
SYNC-201ENST00000373484 A1CFQ9NQ94 594 aaKnown RBP23.42■■□□□ 1.34
SYNC-201ENST00000373484 DNAJC25-GNG10A0A024R161 153 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 NFIBO00712 420 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 PGK2P07205 417 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 ELNP15502 786 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 SLC5A4Q9NY91 659 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 PFASO15067 1338 aa23.41■■□□□ 1.34
SYNC-201ENST00000373484 TRIB2Q92519 343 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 DDX11Q96FC9 970 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 TPCN1Q9ULQ1 816 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 MCM3APO60318 1980 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 CCDC192P0DO97 292 aa23.4■■□□□ 1.34
SYNC-201ENST00000373484 CCT2P78371 535 aaKnown RBP23.4■■□□□ 1.34
SYNC-201ENST00000373484 TRAF1Q13077 416 aa23.4■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms