RNA–Protein interactions for RNA: ENST00000373264.4

CDK9-201, Transcript of cyclin dependent kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK9, Length 2,463 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-201ENST00000373264 EXOC1Q9NV70 894 aa26.71■■□□□ 1.87
CDK9-201ENST00000373264 TRPC5Q9UL62 973 aaPredicted RBP26.71■■□□□ 1.87
CDK9-201ENST00000373264 ANKRD31Q8N7Z5 1873 aa26.7■■□□□ 1.87
CDK9-201ENST00000373264 RASSF10A6NK89 507 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 RAD21O60216 631 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 DMTNQ08495 405 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 CALCRLQ16602 461 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 CDC42EP5Q6NZY7 148 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 AGPAT5Q9NUQ2 364 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 SERPINB13Q9UIV8 391 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 ADCY7P51828 1080 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 KCNK18Q7Z418 384 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 TMTC1Q8IUR5 882 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 CCDC51Q96ER9 411 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 QTRT2Q9H974 415 aaKnown RBP26.7■■□□□ 1.86
CDK9-201ENST00000373264 PRDM4Q9UKN5 801 aa26.7■■□□□ 1.86
CDK9-201ENST00000373264 KIF5CO60282 957 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 CYP26C1Q6V0L0 522 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 RSRC2Q7L4I2 434 aaKnown RBP26.69■■□□□ 1.86
CDK9-201ENST00000373264 GPIHBP1Q8IV16 184 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 KRT222Q8N1A0 295 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 GLIS3Q8NEA6 775 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 P2RX5Q93086 422 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 TUBGCP2Q9BSJ2 902 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 COA1Q9GZY4 146 aa26.69■■□□□ 1.86
CDK9-201ENST00000373264 MYMKA6NI61 221 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 USP17L10C9JJH3 530 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 SNHG28P0DPA3 235 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 STIM1Q13586 685 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 WDR59Q6PJI9 974 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 C7orf25Q9BPX7 421 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 THAP9Q9H5L6 903 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 DBNDD1Q9H9R9 158 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 LRWD1Q9UFC0 647 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 SRGNP10124 158 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 TCP10Q12799 353 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 ZBTB9Q96C00 473 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 SEMA6BQ9H3T3 888 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 LRRC37AA6NMS7 1700 aa26.68■■□□□ 1.86
CDK9-201ENST00000373264 ZNF543Q08ER8 600 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 ECM1Q16610 540 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 APOBEC3HQ6NTF7 200 aaKnown RBP26.67■■□□□ 1.86
CDK9-201ENST00000373264 ZHX1Q9UKY1 873 aaPredicted RBP26.67■■□□□ 1.86
CDK9-201ENST00000373264 TTLL1O95922 423 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 PNMA6AP0CW24 399 aaPredicted RBP26.67■■□□□ 1.86
CDK9-201ENST00000373264 SMARCA1P28370 1054 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 SLC27A3Q5K4L6 730 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 CNOT6LQ96LI5 555 aaKnown RBP26.67■■□□□ 1.86
CDK9-201ENST00000373264 PLIN4Q96Q06 1357 aa26.67■■□□□ 1.86
CDK9-201ENST00000373264 ESYT2A0FGR8 921 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 EEF1GP26641 437 aaKnown RBP26.66■■□□□ 1.86
CDK9-201ENST00000373264 CCDC96Q2M329 555 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 ASPRV1Q53RT3 343 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 DNAJC18Q9H819 358 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 MYL1P05976 194 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 CCNE1P24864 410 aa26.66■■□□□ 1.86
CDK9-201ENST00000373264 MAGEC2Q9UBF1 373 aaPredicted RBP26.66■■□□□ 1.86
CDK9-201ENST00000373264 ZRANB2O95218 330 aaKnown RBP eCLIP26.65■■□□□ 1.86
CDK9-201ENST00000373264 KIF4BQ2VIQ3 1234 aa26.65■■□□□ 1.86
CDK9-201ENST00000373264 DHTKD1Q96HY7 919 aaPredicted RBP26.65■■□□□ 1.86
CDK9-201ENST00000373264 PARD6BQ9BYG5 372 aa26.65■■□□□ 1.86
CDK9-201ENST00000373264 MSL1Q68DK7 614 aa26.65■■□□□ 1.86
CDK9-201ENST00000373264 COL23A1Q86Y22 540 aaPredicted RBP26.65■■□□□ 1.86
CDK9-201ENST00000373264 CALML4Q96GE6 196 aa26.65■■□□□ 1.86
CDK9-201ENST00000373264 CUEDC2Q9H467 287 aa26.65■■□□□ 1.86
CDK9-201ENST00000373264 ZNF219Q9P2Y4 722 aaPredicted RBP26.65■■□□□ 1.86
CDK9-201ENST00000373264 LUC7L2Q9Y383 392 aaKnown RBP26.65■■□□□ 1.86
CDK9-201ENST00000373264 EPN1Q9Y6I3 576 aaPredicted RBP26.65■■□□□ 1.86
CDK9-201ENST00000373264 NDUFA10O95299 355 aa26.64■■□□□ 1.86
CDK9-201ENST00000373264 MIIPQ5JXC2 388 aa26.64■■□□□ 1.86
CDK9-201ENST00000373264 OR8K1Q8NGG5 319 aa26.64■■□□□ 1.86
CDK9-201ENST00000373264 GUCA1BQ9UMX6 200 aa26.64■■□□□ 1.86
CDK9-201ENST00000373264 SASH3O75995 380 aa26.64■■□□□ 1.85
CDK9-201ENST00000373264 LRRC41Q15345 812 aa26.64■■□□□ 1.85
CDK9-201ENST00000373264 KIAA0825Q8IV33 1275 aa26.64■■□□□ 1.85
CDK9-201ENST00000373264 TRIM14Q14142 442 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 TMCO3Q6UWJ1 677 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 PLA2G4AP47712 749 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 SNAP25P60880 206 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 TBC1D8BQ0IIM8 1120 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 SV2BQ7L1I2 683 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 SNX29Q8TEQ0 813 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 DNAJC7Q99615 494 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 CAPN11Q9UMQ6 739 aa26.63■■□□□ 1.85
CDK9-201ENST00000373264 PNMA6FA0A0J9YX94 578 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L15C9J2P7 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L13C9JLJ4 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L11C9JVI0 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L18D6R9N7 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L22D6RA61 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L17D6RBQ6 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L19D6RCP7 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L20D6RJB6 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 TAL1P17542 331 aaPredicted RBP26.62■■□□□ 1.85
CDK9-201ENST00000373264 MTIF2P46199 727 aaKnown RBP26.62■■□□□ 1.85
CDK9-201ENST00000373264 HERVK_113P62684 666 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L24Q0WX57 530 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 USP17L6PQ6QN14 398 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 KRT27Q7Z3Y8 459 aa26.62■■□□□ 1.85
CDK9-201ENST00000373264 HAS1Q92839 578 aa26.62■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms