RNA–Protein interactions for RNA: ENST00000372998.1

LCN2-202, Transcript of lipocalin 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LCN2, Length 631 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCN2-202ENST00000372998 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.13□□□□□ -0.47
LCN2-202ENST00000372998 SYN2Q92777 582 aaPredicted RBP12.13□□□□□ -0.47
LCN2-202ENST00000372998 TRIM9Q9C026 710 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 NARFQ9UHQ1 456 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 MAD2L2Q9UI95 211 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 PLAGL2Q9UPG8 496 aa12.13□□□□□ -0.47
LCN2-202ENST00000372998 C10orf71Q711Q0 1435 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 CYP2D7A0A087X1C5 515 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 SSU72P8A0A1W2PR75 194 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 GOLGA8KD6RF30 607 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 HMGB2P26583 209 aaKnown RBP12.12□□□□□ -0.47
LCN2-202ENST00000372998 TNFRSF8P28908 595 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 HERVK_113P62684 666 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 NAALADL2Q58DX5 795 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 ALS2CLQ60I27 953 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 NEDD1Q8NHV4 660 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 STAMQ92783 540 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 CHP1Q99653 195 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 RASSF4Q9H2L5 321 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 DEF6Q9H4E7 631 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 BMP2KQ9NSY1 1161 aaPredicted RBP12.12□□□□□ -0.47
LCN2-202ENST00000372998 HYOU1Q9Y4L1 999 aa12.12□□□□□ -0.47
LCN2-202ENST00000372998 KDM3AQ9Y4C1 1321 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 B4DLN1 442 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 KLRF2D3W0D1 207 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 H3BQF6 201 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 WNT7AO00755 349 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 PJA2O43164 708 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 ZPR1O75312 459 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 IDEP14735 1019 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 PLCG1P19174 1290 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 TNNT3P45378 269 aaPredicted RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 ST5P78524 1137 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 PPFIA1Q13136 1202 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 INF2Q27J81 1249 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 VWA3BQ502W6 1294 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 ASPRV1Q53RT3 343 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 CCDC181Q5TID7 509 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 EMBQ6PCB8 327 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 WDR59Q6PJI9 974 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 NBPF5PQ86XG9 351 aaPredicted RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 NEK11Q8NG66 645 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 ZNF384Q8TF68 577 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 EPC1Q9H2F5 836 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 FAM184BQ9ULE4 1060 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 SNX12Q9UMY4 172 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 REXO2Q9Y3B8 237 aaKnown RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 ATP8B3O60423 1300 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 FLT1P17948 1338 aa12.11□□□□□ -0.47
LCN2-202ENST00000372998 ZNF335Q9H4Z2 1342 aaPredicted RBP12.11□□□□□ -0.47
LCN2-202ENST00000372998 ATAD5Q96QE3 1844 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 SMCO2A6NFE2 343 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 CCNT1O60563 726 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 RPS6KA4O75676 772 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 ANXA13P27216 316 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 HSPA2P54652 639 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 MAPK8IP2Q13387 824 aaPredicted RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 IFI16Q16666 785 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 KRT79Q5XKE5 535 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 CCNI2Q6ZMN8 369 aaPredicted RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 C16orf86Q6ZW13 317 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 SPATS2Q86XZ4 545 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 REXO1Q8N1G1 1221 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 KCTD17Q8N5Z5 321 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 EIF1ADQ8N9N8 165 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 TBC1D22AQ8WUA7 517 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 CELF1Q92879 486 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 CEP63Q96MT8 703 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 TMEM47Q9BQJ4 181 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 IFIH1Q9BYX4 1025 aaKnown RBP12.1□□□□□ -0.47
LCN2-202ENST00000372998 NT5C3AQ9H0P0 336 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 JADE2Q9NQC1 790 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 FAN1Q9Y2M0 1017 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 SPATA31A5Q5VU36 1347 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 FAM205AQ6ZU69 1335 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 SPATA31A7Q8IWB4 1347 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 MYO3BQ8WXR4 1341 aa12.1□□□□□ -0.47
LCN2-202ENST00000372998 PLIN4Q96Q06 1357 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 GRID2IPA4D2P6 1211 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 CES2O00748 559 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 AKR1B10O60218 316 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 PPFIA4O75335 1185 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 NOVP48745 357 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 EPHB4P54760 987 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 CALCRLQ16602 461 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 CCDC96Q2M329 555 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 ANKRD40Q6AI12 368 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 NCAPH2Q6IBW4 605 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 PPP4R3CPQ6ZMV5 832 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 TEX2Q8IWB9 1127 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 NOA1Q8NC60 698 aaKnown RBP12.09□□□□□ -0.47
LCN2-202ENST00000372998 FAM76AQ8TAV0 307 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 GPKOWQ92917 476 aaPredicted RBP eCLIP12.09□□□□□ -0.47
LCN2-202ENST00000372998 FAM163AQ96GL9 167 aaPredicted RBP12.09□□□□□ -0.47
LCN2-202ENST00000372998 NOX5Q96PH1 765 aa12.09□□□□□ -0.47
LCN2-202ENST00000372998 RUFY1Q96T51 708 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms