RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 LONP1P36776 959 aaKnown RBP26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 GADL1Q6ZQY3 521 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 TNNC2P02585 160 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 FAM47CQ5HY64 1035 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 GABPB2Q8TAK5 448 aaPredicted RBP26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 ICA1Q05084 483 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 BFSP1Q12934 665 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 DMP1Q13316 513 aaPredicted RBP26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 HADHQ16836 314 aaKnown RBP26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 IQCDQ96DY2 449 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 APOL6Q9BWW8 343 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 MYOM2P54296 1465 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 FAM135BQ49AJ0 1406 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 APBA3O96018 575 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 TMOD1P28289 359 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 FBXO18Q8NFZ0 1043 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 POMGNT1Q8WZA1 660 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 RABGAP1Q9Y3P9 1069 aa26.16■■□□□ 1.78
RAPGEF1-203ENST00000372195 NR5A1Q13285 461 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 SMCR8Q8TEV9 937 aaPredicted RBP26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 CACTINQ8WUQ7 758 aaKnown RBP26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 EPB41L5Q9HCM4 733 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 SAMSN1Q9NSI8 373 aaKnown RBP26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 FAM71BQ8TC56 605 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 SMYD2Q9NRG4 433 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 ATP7AQ04656 1500 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 LRRN2O75325 713 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 FTCDO95954 541 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 H2AFZP0C0S5 128 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 H2AFVQ71UI9 128 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 TCP1P17987 556 aaKnown RBP26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 ALDH1B1P30837 517 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 SLFN13Q68D06 897 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 HOMER3Q9NSC5 361 aa26.15■■□□□ 1.78
RAPGEF1-203ENST00000372195 SGK1O00141 431 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 POLGP54098 1239 aaPredicted RBP26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 GNL3Q9BVP2 549 aaKnown RBP eCLIP26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 SEC31BQ9NQW1 1179 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 CDC25BP30305 580 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 NCAPG2Q86XI2 1143 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 DISC1Q9NRI5 854 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 ADAMTS12P58397 1594 aa26.14■■□□□ 1.78
RAPGEF1-203ENST00000372195 SOS2Q07890 1332 aaPredicted RBP26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 RASSF2P50749 326 aa26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 YWHAEP62258 255 aaKnown RBP26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 MRPS25P82663 173 aaKnown RBP26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 ZMYM1Q5SVZ6 1142 aa26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 RFX6Q8HWS3 928 aa26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 PCDHB4Q9Y5E5 795 aa26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 PCDHA1Q9Y5I3 950 aa26.14■■□□□ 1.77
RAPGEF1-203ENST00000372195 SPDYE16A6NNV3 312 aaPredicted RBP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 SPDYE2Q495Y8 402 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 GOLGA5Q8TBA6 731 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 H7C0C1 242 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 ATP5OP48047 213 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 ODR4Q5SWX8 454 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 C4orf50Q6ZRC1 276 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 PCDHA4Q9UN74 947 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 IFT88Q13099 833 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 SLC39A14Q15043 492 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 MRPL11Q9Y3B7 192 aaKnown RBP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 SLC7A5Q01650 507 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 USPL1Q5W0Q7 1092 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 FAM133AQ8N9E0 248 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 TDRD7Q8NHU6 1098 aaKnown RBP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 FAN1Q9Y2M0 1017 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 COL4A3BPQ9Y5P4 624 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 PCCAP05165 728 aaPredicted RBP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 YWHAGP61981 247 aaKnown RBP eCLIP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 PUS7LQ9H0K6 701 aaKnown RBP26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 CCPG1Q9ULG6 757 aa26.13■■□□□ 1.77
RAPGEF1-203ENST00000372195 KCNQ4P56696 695 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 SUPT20HQ8NEM7 779 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 AIFM3Q96NN9 605 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 SEPT9Q9UHD8 586 aaPredicted RBP26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 CLRN2A0PK11 232 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 CFAP61Q8NHU2 1237 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 USP21Q9UK80 565 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 CYP2D7A0A087X1C5 515 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 ZKSCAN8Q15776 578 aaPredicted RBP26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 SPTLC3Q9NUV7 552 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 PPP6R2O75170 966 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 CDC23Q9UJX2 597 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 MAGI2Q86UL8 1455 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 NR2F2P24468 414 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 GNPTABQ3T906 1256 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 APOA5Q6Q788 366 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 ZBTB8OSQ8IWT0 167 aa26.12■■□□□ 1.77
RAPGEF1-203ENST00000372195 SNAP25P60880 206 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 TRIP13Q15645 432 aaPredicted RBP26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 RCN2Q14257 317 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 LARP4BQ92615 738 aaKnown RBP26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 ASAP1Q9ULH1 1129 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 SERPINB6P35237 376 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 SNCBQ16143 134 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 COA7Q96BR5 231 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 DYNLT1P63172 113 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 LRRC8CQ8TDW0 803 aa26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 PSDA5PKW4 1024 aaPredicted RBP26.11■■□□□ 1.77
RAPGEF1-203ENST00000372195 GSTA1P08263 222 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms