RNA–Protein interactions for RNA: ENST00000372189.7

RAPGEF1-201, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,085 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-201ENST00000372189 BLZF1Q9H2G9 400 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 PAIP2BQ9ULR5 123 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 LAMC1P11047 1609 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 ECE2O60344 883 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 TMOD1P28289 359 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 TTC19Q6DKK2 380 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 UBL4BQ8N7F7 174 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 SMC1BQ8NDV3 1235 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 PCDHB13Q9Y5F0 798 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 MGEA5O60502 916 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 MKRN3Q13064 507 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 SYNE4Q8N205 404 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 RNF169Q8NCN4 708 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 CACTINQ8WUQ7 758 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 NACA2Q9H009 215 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 PLEKHG2Q9H7P9 1386 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 H0YCG3 227 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 STAT2P52630 851 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 RASGRF1Q13972 1273 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 CFAP221Q4G0U5 840 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 PI16Q6UXB8 463 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 C2orf69Q8N8R5 385 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 NELFBQ8WX92 580 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 XPO4Q9C0E2 1151 aaKnown RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 GIMAP4Q9NUV9 329 aa14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 FAF1Q9UNN5 650 aaPredicted RBP14.61□□□□□ -0.07
RAPGEF1-201ENST00000372189 PRKAB2O43741 272 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 PPFIA4O75335 1185 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 MYSM1Q5VVJ2 828 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 SND1Q7KZF4 910 aaKnown RBP eCLIP14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 E9PCH4 1651 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 SPOPO43791 374 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 TNNI1P19237 187 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 ATICP31939 592 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 PROCA1Q8NCQ7 364 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 AGTPBP1Q9UPW5 1226 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 CCDC14Q49A88 953 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 FOXP4Q8IVH2 680 aaPredicted RBP14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 ACRBPQ8NEB7 543 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 IQCDQ96DY2 449 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 GBP5Q96PP8 586 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 PPP1R12CQ9BZL4 782 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 LSG1Q9H089 658 aaKnown RBP14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 TPCN1Q9ULQ1 816 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 AOC3Q16853 763 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 MAP4K1Q92918 833 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 SUGCTQ9HAC7 445 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 NUB1Q9Y5A7 615 aa14.6□□□□□ -0.07
RAPGEF1-201ENST00000372189 LIG4P49917 911 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 ADPGKQ9BRR6 497 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 ERCC5P28715 1186 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 POLGP54098 1239 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 YWHAEP62258 255 aaKnown RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 TSPY1Q01534 308 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 EFCC1Q9HA90 598 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 TAB2Q9NYJ8 693 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 RNF181Q9P0P0 153 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 ABCA6Q8N139 1617 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 EFCAB8A8MWE9 144 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 DTNBO60941 627 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 PDIA3P30101 505 aaKnown RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 CRKP46108 304 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 PSMD7P51665 324 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 IGBP1P78318 339 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 SYDE2Q5VT97 1194 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 VCX3BQ9H321 246 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 MINPP1Q9UNW1 487 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 DNAJC8O75937 253 aaPredicted RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 BCRP11274 1271 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 MAGEA1P43355 309 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 PIH1D3Q9NQM4 214 aaKnown RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 FAM169AQ9Y6X4 670 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 CDHR2Q9BYE9 1310 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 CCND2P30279 289 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 PUS7LQ9H0K6 701 aaKnown RBP14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 SERTAD1Q9UHV2 236 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 SETBP1Q9Y6X0 1596 aa14.59□□□□□ -0.07
RAPGEF1-201ENST00000372189 TPD52P55327 224 aaPredicted RBP14.58□□□□□ -0.07
RAPGEF1-201ENST00000372189 SLF1Q9BQI6 1058 aa14.58□□□□□ -0.07
RAPGEF1-201ENST00000372189 ARIH1Q9Y4X5 557 aaPredicted RBP14.58□□□□□ -0.07
RAPGEF1-201ENST00000372189 PTPRMP28827 1452 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 E7EVH7 732 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 GNA14O95837 355 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 ERCC3P19447 782 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 YARSP54577 528 aaKnown RBP14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 RNASE9P60153 205 aaKnown RBP14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 FAM193BQ96PV7 902 aaPredicted RBP14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 RABEP2Q9H5N1 569 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 NDC80O14777 642 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 DAPK3O43293 454 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 GAS8O95995 478 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 SYCE1Q8N0S2 351 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 STAMQ92783 540 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 GOLGA8KD6RF30 607 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 K7ENM7 598 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 KIF1CO43896 1103 aaKnown RBP14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 SLC16A2P36021 539 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 DYNLL2Q96FJ2 89 aa14.58□□□□□ -0.08
RAPGEF1-201ENST00000372189 PNMA3Q9UL41 463 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms