RNA–Protein interactions for RNA: ENST00000372077.8

VEGFA-206, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 2,834 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-206ENST00000372077 HOXC10Q9NYD6 342 aa21■□□□□ 0.95
VEGFA-206ENST00000372077 OPLAHO14841 1288 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 TRAPPC10P48553 1259 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 FASTKD5Q7L8L6 764 aaKnown RBP20.99■□□□□ 0.95
VEGFA-206ENST00000372077 BIN2Q9UBW5 565 aaPredicted RBP20.99■□□□□ 0.95
VEGFA-206ENST00000372077 NRBP1Q9UHY1 535 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 ABCB11O95342 1321 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 CCDC194A0A1B0GVG4 234 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 NR1I2O75469 434 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 TAL1P17542 331 aaPredicted RBP20.99■□□□□ 0.95
VEGFA-206ENST00000372077 SNAPC2Q13487 334 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 PNMA2Q9UL42 364 aa20.99■□□□□ 0.95
VEGFA-206ENST00000372077 PTPAQ15257 358 aa20.98■□□□□ 0.95
VEGFA-206ENST00000372077 SF3A1Q15459 793 aaKnown RBP20.98■□□□□ 0.95
VEGFA-206ENST00000372077 AGTPBP1Q9UPW5 1226 aa20.98■□□□□ 0.95
VEGFA-206ENST00000372077 MRPL11Q9Y3B7 192 aaKnown RBP20.98■□□□□ 0.95
VEGFA-206ENST00000372077 AGBL1Q96MI9 1066 aa20.98■□□□□ 0.95
VEGFA-206ENST00000372077 TMEM260Q9NX78 707 aa20.98■□□□□ 0.95
VEGFA-206ENST00000372077 MEIS2O14770 477 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 LRMPQ12912 555 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 SLC39A14Q15043 492 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 JAKMIP3Q5VZ66 844 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 PCDHB6Q9Y5E3 794 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 SMCHD1A6NHR9 2005 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 SPDYE16A6NNV3 312 aaPredicted RBP20.97■□□□□ 0.95
VEGFA-206ENST00000372077 OAZ1P54368 228 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 UBE2SQ16763 222 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 ANO6Q4KMQ2 910 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 GPAT2Q6NUI2 795 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 RAVER2Q9HCJ3 691 aaKnown RBP20.97■□□□□ 0.95
VEGFA-206ENST00000372077 EIF4ENIF1Q9NRA8 985 aaKnown RBP20.97■□□□□ 0.95
VEGFA-206ENST00000372077 CCPG1Q9ULG6 757 aa20.97■□□□□ 0.95
VEGFA-206ENST00000372077 NOLC1Q14978 699 aaKnown RBP eCLIP20.96■□□□□ 0.955e-26■□□□□ 10.1
VEGFA-206ENST00000372077 NONOQ15233 471 aaKnown RBP eCLIP20.96■□□□□ 0.953e-6■■■□□ 16.3
VEGFA-206ENST00000372077 NUP62CLQ9H1M0 184 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 PIK3CDO00329 1044 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 ATP2A1O14983 1001 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 PTGS1P23219 599 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 STK38Q15208 465 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 MCTP2Q6DN12 878 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 SMC1BQ8NDV3 1235 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 MS4A4AQ96JQ5 239 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 DNAJC25Q9H1X3 360 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 TNMDQ9H2S6 317 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 PRDM10Q9NQV6 1147 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 CTDP1Q9Y5B0 961 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-206ENST00000372077 MORC2Q9Y6X9 1032 aaPredicted RBP20.96■□□□□ 0.95
VEGFA-206ENST00000372077 WNT7AO00755 349 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 SPRYD7Q5W111 196 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 USP17L6PQ6QN14 398 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 KCNG4Q8TDN1 519 aa20.96■□□□□ 0.95
VEGFA-206ENST00000372077 ZBTB48P10074 688 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-206ENST00000372077 HUNKP57058 714 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 HS1BP3Q53T59 392 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 TTC38Q5R3I4 469 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 CPXCR1Q8N123 301 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 PGBD1Q96JS3 809 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 SPTLC2O15270 562 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 GTF2A2P52657 109 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 INF2Q27J81 1249 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 LBX2Q6XYB7 198 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 KCNF1Q9H3M0 494 aa20.95■□□□□ 0.94
VEGFA-206ENST00000372077 ZNF214Q9UL59 606 aaPredicted RBP20.95■□□□□ 0.94
VEGFA-206ENST00000372077 COL11A1P12107 1806 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-206ENST00000372077 ATP2B1P20020 1258 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 AP3B2Q13367 1082 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 CLEC4DQ8WXI8 215 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 PPP6R2O75170 966 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 CETPP11597 493 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 TYRO3Q06418 890 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 PABPC4Q13310 644 aaKnown RBP eCLIP20.94■□□□□ 0.945e-10■■■■■ 60.6
VEGFA-206ENST00000372077 TMEM132BQ14DG7 1078 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 P2RX7Q99572 595 aaKnown RBP20.94■□□□□ 0.94
VEGFA-206ENST00000372077 ASCC2Q9H1I8 757 aaPredicted RBP20.94■□□□□ 0.94
VEGFA-206ENST00000372077 CEP131Q9UPN4 1083 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 A0A0G2JMZ2 1700 aa20.94■□□□□ 0.94
VEGFA-206ENST00000372077 GHRHRQ02643 423 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 POTEEQ6S8J3 1075 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 TBCKQ8TEA7 893 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 SAPCD2Q86UD0 394 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 TBC1D5Q92609 795 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 FUCA2Q9BTY2 467 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 MRVI1Q9Y6F6 885 aa20.93■□□□□ 0.94
VEGFA-206ENST00000372077 EDIL3O43854 480 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 BMP15O95972 392 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 FOSP01100 380 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-206ENST00000372077 IRX3P78415 501 aaPredicted RBP20.92■□□□□ 0.94
VEGFA-206ENST00000372077 MB21D1Q8N884 522 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 PCDHA7Q9UN72 937 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 CCDC192P0DO97 292 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 ALAS1P13196 640 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 ZNF174Q15697 407 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 NEK8Q86SG6 692 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 SAMD3Q8N6K7 520 aa20.92■□□□□ 0.94
VEGFA-206ENST00000372077 GCOM1H8Y6P7 765 aaPredicted RBP20.91■□□□□ 0.94
VEGFA-206ENST00000372077 TOMM70O94826 608 aa20.91■□□□□ 0.94
VEGFA-206ENST00000372077 POLR2MP0CAP2 368 aa20.91■□□□□ 0.94
VEGFA-206ENST00000372077 OSBPP22059 807 aa20.91■□□□□ 0.94
VEGFA-206ENST00000372077 SLC45A1Q9Y2W3 748 aa20.91■□□□□ 0.94
VEGFA-206ENST00000372077 ANO3Q9BYT9 981 aa20.91■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms