RNA–Protein interactions for RNA: ENST00000372044.7

CCDC17-201, Transcript of coiled-coil domain containing 17, humanhuman

TSL 2

Gene CCDC17, Length 1,873 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC17-201ENST00000372044 SYMPKQ92797 1274 aaKnown RBP20.69■□□□□ 0.9
CCDC17-201ENST00000372044 OTUD5Q96G74 571 aa20.69■□□□□ 0.9
CCDC17-201ENST00000372044 GLT8D2Q9H1C3 349 aa20.69■□□□□ 0.9
CCDC17-201ENST00000372044 CCPG1Q9ULG6 757 aa20.69■□□□□ 0.9
CCDC17-201ENST00000372044 TRPM7Q96QT4 1865 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 IRF6O14896 467 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 NEMFO60524 1076 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 LETM1O95202 739 aaPredicted RBP20.68■□□□□ 0.9
CCDC17-201ENST00000372044 CFBP00751 764 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 LONRF3Q496Y0 759 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 SH3D19Q5HYK7 790 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 TREML2Q5T2D2 321 aa20.68■□□□□ 0.9
CCDC17-201ENST00000372044 ARL6IP4Q66PJ3 421 aaKnown RBP20.68■□□□□ 0.9
CCDC17-201ENST00000372044 A0A087WWV3 80 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 VWA5AO00534 786 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 CDC25AP30304 524 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 PDILTQ8N807 584 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 CRYGNQ8WXF5 182 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 ZNF408Q9H9D4 720 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 NMRK2Q9NPI5 230 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 TMOD4Q9NZQ9 345 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 PIK3CDO00329 1044 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 POLR2DO15514 142 aaKnown RBP20.67■□□□□ 0.9
CCDC17-201ENST00000372044 AP3B2Q13367 1082 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 CATSPERGQ6ZRH7 1159 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 TSPY26PQ9H489 355 aa20.67■□□□□ 0.9
CCDC17-201ENST00000372044 ABCB11O95342 1321 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 PP2D1A8MPX8 630 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 NFIBO00712 420 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 FCHSD1Q86WN1 690 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 REPS2Q8NFH8 660 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 ZNF526Q8TF50 670 aaPredicted RBP20.66■□□□□ 0.9
CCDC17-201ENST00000372044 CLEC4DQ8WXI8 215 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 GRPEL1Q9HAV7 217 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 FAM13BQ9NYF5 915 aa20.66■□□□□ 0.9
CCDC17-201ENST00000372044 MRPL11Q9Y3B7 192 aaKnown RBP20.66■□□□□ 0.9
CCDC17-201ENST00000372044 SPDYE5A6NIY4 337 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 OR52Z1P0C646 297 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 DSG3P32926 999 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 MUM1L1Q5H9M0 696 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 ERO1BQ86YB8 467 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 GJA10Q969M2 543 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 MTMR9Q96QG7 549 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 SDF4Q9BRK5 362 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 HOMER2Q9NSB8 354 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 KIAA1217Q5T5P2 1943 aa20.65■□□□□ 0.9
CCDC17-201ENST00000372044 FOXN1O15353 648 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 ALAS1P13196 640 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 PPATQ06203 517 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 PPP4R3AQ6IN85 833 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 POTEEQ6S8J3 1075 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 DTHD1Q6ZMT9 781 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 RBM46Q8TBY0 533 aaKnown RBP20.64■□□□□ 0.9
CCDC17-201ENST00000372044 UIMC1Q96RL1 719 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 ADAMTS5Q9UNA0 930 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 RIPK3Q9Y572 518 aa20.64■□□□□ 0.9
CCDC17-201ENST00000372044 SPDYE3A6NKU9 549 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 GJA5P36382 358 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 PRPHP41219 470 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 ARHGAP4P98171 946 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 LDLRAD1Q5T700 205 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 KRBA2Q6ZNG9 492 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 RNF214Q8ND24 703 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 OPTNQ96CV9 577 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 TIGD1Q96MW7 591 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 DDX25Q9UHL0 483 aaKnown RBP20.64■□□□□ 0.89
CCDC17-201ENST00000372044 SERTAD1Q9UHV2 236 aa20.64■□□□□ 0.89
CCDC17-201ENST00000372044 SPDYE16A6NNV3 312 aaPredicted RBP20.63■□□□□ 0.89
CCDC17-201ENST00000372044 GCOM1H8Y6P7 765 aaPredicted RBP20.63■□□□□ 0.89
CCDC17-201ENST00000372044 LAD1O00515 517 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 ACTN4O43707 911 aaKnown RBP20.63■□□□□ 0.89
CCDC17-201ENST00000372044 PEX10O60683 326 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 POLR2MP0CAP2 368 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 XRCC6P12956 609 aaKnown RBP eCLIP20.63■□□□□ 0.89
CCDC17-201ENST00000372044 SREBF1P36956 1147 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 TYRO3Q06418 890 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 TRAF1Q13077 416 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 COG2Q14746 738 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 CALCRLQ16602 461 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 ARMC9Q7Z3E5 817 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 COL20A1Q9P218 1284 aa20.63■□□□□ 0.89
CCDC17-201ENST00000372044 A0A0G2JLL6 359 aaPredicted RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 CTAGE5O15320 804 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 LONP1P36776 959 aaKnown RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 ORC2Q13416 577 aaPredicted RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 GADL1Q6ZQY3 521 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 PRRT2Q7Z6L0 340 aaPredicted RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 HAS1Q92839 578 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 ZNF214Q9UL59 606 aaPredicted RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 ZBED4O75132 1171 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 FOSP01100 380 aaPredicted RBP20.62■□□□□ 0.89
CCDC17-201ENST00000372044 TECP42680 631 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 TXKP42681 527 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 UBXN2AP68543 259 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 PNOCQ13519 176 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 TMEM132BQ14DG7 1078 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 GRAMD1CQ8IYS0 662 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 DHX58Q96C10 678 aa20.62■□□□□ 0.89
CCDC17-201ENST00000372044 FAM86B1E9PN63 330 aa20.61■□□□□ 0.89
CCDC17-201ENST00000372044 FAM86B2P0C5J1 330 aa20.61■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms