RNA–Protein interactions for RNA: ENST00000371419.6

PFDN4-201, Transcript of prefoldin subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN4, Length 1,462 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN4-201ENST00000371419 NECAB1Q8N987 351 aa18.37■□□□□ 0.53
PFDN4-201ENST00000371419 FAM133AQ8N9E0 248 aa18.37■□□□□ 0.53
PFDN4-201ENST00000371419 GTF3C6Q969F1 213 aa18.37■□□□□ 0.53
PFDN4-201ENST00000371419 ZSCAN31Q96LW9 406 aaPredicted RBP18.37■□□□□ 0.53
PFDN4-201ENST00000371419 SLC26A6Q9BXS9 759 aa18.37■□□□□ 0.53
PFDN4-201ENST00000371419 BIN2Q9UBW5 565 aaPredicted RBP18.37■□□□□ 0.53
PFDN4-201ENST00000371419 hCG_1984214I3L0E3 225 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 OPLAHO14841 1288 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 CALML3P27482 149 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 CNTN2Q02246 1040 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
PFDN4-201ENST00000371419 PFKFB3Q16875 520 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-201ENST00000371419 SLC30A10Q6XR72 485 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 HSCBQ8IWL3 235 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 SAMD3Q8N6K7 520 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 ZNF713Q8N859 430 aaPredicted RBP18.36■□□□□ 0.53
PFDN4-201ENST00000371419 TBC1D5Q92609 795 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 GPKOWQ92917 476 aaPredicted RBP eCLIP18.36■□□□□ 0.53
PFDN4-201ENST00000371419 ARMC5Q96C12 935 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 FLRT1Q9NZU1 646 aa18.36■□□□□ 0.53
PFDN4-201ENST00000371419 CENPFP49454 3210 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 PPFIA3O75145 1194 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 CFBP00751 764 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 SCG2P13521 617 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 MCM2P49736 904 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 UBXN2AP68543 259 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 GHRHRQ02643 423 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 MFSD14CQ5VZR4 134 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 WWC2Q6AWC2 1192 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 ZNF467Q7Z7K2 595 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-201ENST00000371419 SH2B1Q9NRF2 756 aaPredicted RBP18.35■□□□□ 0.53
PFDN4-201ENST00000371419 MAP3K20Q9NYL2 800 aaKnown RBP18.35■□□□□ 0.53
PFDN4-201ENST00000371419 PLXNA1Q9UIW2 1896 aa18.35■□□□□ 0.53
PFDN4-201ENST00000371419 SOWAHBA6NEL2 793 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 IGHA2P01877 340 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 INHAP05111 366 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 HSD17B4P51659 736 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 PKN1Q16512 942 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 PPP1R18Q6NYC8 613 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 MSL3Q8N5Y2 521 aaKnown RBP18.34■□□□□ 0.53
PFDN4-201ENST00000371419 SYTL5Q8TDW5 730 aaPredicted RBP18.34■□□□□ 0.53
PFDN4-201ENST00000371419 FGD4Q96M96 766 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 TINF2Q9BSI4 451 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 BARHL2Q9NY43 387 aa18.34■□□□□ 0.53
PFDN4-201ENST00000371419 ADD3Q9UEY8 706 aaKnown RBP18.34■□□□□ 0.53
PFDN4-201ENST00000371419 RBBP6Q7Z6E9 1792 aaKnown RBP18.34■□□□□ 0.53
PFDN4-201ENST00000371419 GCOM1H8Y6P7 765 aaPredicted RBP18.33■□□□□ 0.53
PFDN4-201ENST00000371419 STXBP3O00186 592 aa18.33■□□□□ 0.53
PFDN4-201ENST00000371419 POLR2MP0CAP2 368 aa18.33■□□□□ 0.53
PFDN4-201ENST00000371419 NAPAP54920 295 aa18.33■□□□□ 0.53
PFDN4-201ENST00000371419 MAMDC4Q6UXC1 1216 aa18.33■□□□□ 0.53
PFDN4-201ENST00000371419 ZNF333Q96JL9 665 aa18.33■□□□□ 0.53
PFDN4-201ENST00000371419 CD2BP2O95400 341 aaKnown RBP18.33■□□□□ 0.52
PFDN4-201ENST00000371419 DEXIO95424 95 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 CTDNEP1O95476 244 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 CYP2C19P33261 490 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 TRIM32Q13049 653 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 ABHD8Q96I13 439 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 PURBQ96QR8 312 aaKnown RBP18.33■□□□□ 0.52
PFDN4-201ENST00000371419 PSTPIP2Q9H939 334 aa18.33■□□□□ 0.52
PFDN4-201ENST00000371419 STK36Q9NRP7 1315 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 ASB14A6NK59 587 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 PRKAR2AP13861 404 aaKnown RBP18.32■□□□□ 0.52
PFDN4-201ENST00000371419 HOXA13P31271 388 aaPredicted RBP18.32■□□□□ 0.52
PFDN4-201ENST00000371419 CACNB2Q08289 660 aaPredicted RBP18.32■□□□□ 0.52
PFDN4-201ENST00000371419 ST3GAL1Q11201 340 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 MAP3K21Q5TCX8 1036 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 TYW1BQ6NUM6 668 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 CCDC83Q8IWF9 413 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 DNERQ8NFT8 737 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 CCDC12Q8WUD4 166 aaPredicted RBP18.32■□□□□ 0.52
PFDN4-201ENST00000371419 CUL5Q93034 780 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 COL20A1Q9P218 1284 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 ASTN1O14525 1302 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 SYNGAP1Q96PV0 1343 aa18.32■□□□□ 0.52
PFDN4-201ENST00000371419 LOC102724159A0A0B4J2E5 919 aa18.31■□□□□ 0.52
PFDN4-201ENST00000371419 PIK3CDO00329 1044 aa18.31■□□□□ 0.52
PFDN4-201ENST00000371419 ALDH5A1P51649 535 aaPredicted RBP18.31■□□□□ 0.52
PFDN4-201ENST00000371419 PWP2Q15269 919 aaKnown RBP18.31■□□□□ 0.52
PFDN4-201ENST00000371419 TEX2Q8IWB9 1127 aa18.31■□□□□ 0.52
PFDN4-201ENST00000371419 NSUN7Q8NE18 718 aaKnown RBP18.31■□□□□ 0.52
PFDN4-201ENST00000371419 LCTP09848 1927 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 SMCO2A6NFE2 343 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 MRPL12P52815 198 aaKnown RBP18.3■□□□□ 0.52
PFDN4-201ENST00000371419 USP17L6PQ6QN14 398 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 ARMCX2Q7L311 632 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 SMARCC2Q8TAQ2 1214 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 NSUN6Q8TEA1 469 aaKnown RBP18.3■□□□□ 0.52
PFDN4-201ENST00000371419 TMX3Q96JJ7 454 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 TAAR1Q96RJ0 339 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 RMDN3Q96TC7 470 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 MPHOSPH6Q99547 160 aaKnown RBP18.3■□□□□ 0.52
PFDN4-201ENST00000371419 LLPHQ9BRT6 129 aaKnown RBP18.3■□□□□ 0.52
PFDN4-201ENST00000371419 GLT8D2Q9H1C3 349 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 RIC8AQ9NPQ8 531 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 SH3GLB2Q9NR46 395 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 ORC3Q9UBD5 711 aaPredicted RBP18.3■□□□□ 0.52
PFDN4-201ENST00000371419 NRBP1Q9UHY1 535 aa18.3■□□□□ 0.52
PFDN4-201ENST00000371419 RPTORQ8N122 1335 aa18.29■□□□□ 0.52
PFDN4-201ENST00000371419 ESYT2A0FGR8 921 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms