RNA–Protein interactions for RNA: ENST00000371320.7

SSBP3-204, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP3, Length 2,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-204ENST00000371320 P2RX5Q93086 422 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 MASTLQ96GX5 879 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 DUSP9Q99956 384 aaKnown RBP32.42■■■□□ 2.78
SSBP3-204ENST00000371320 IRX2Q9BZI1 471 aaPredicted RBP32.42■■■□□ 2.78
SSBP3-204ENST00000371320 MRFAP1Q9Y605 127 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 C10orf71Q711Q0 1435 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 KIF5CO60282 957 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 CCNE1P24864 410 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 PPP1R2P41236 205 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 NFIAQ12857 509 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 STK4Q13043 487 aa32.42■■■□□ 2.78
SSBP3-204ENST00000371320 SMAP1Q8IYB5 467 aaPredicted RBP32.42■■■□□ 2.78
SSBP3-204ENST00000371320 A0A1W2PQC6 194 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 TNNI2P48788 182 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 SV2BQ7L1I2 683 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 RAB34Q9BZG1 259 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 MYH8P13535 1937 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 EDIL3O43854 480 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 CRKP46108 304 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 GRB10Q13322 594 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 ZNF507Q8TCN5 953 aa32.41■■■□□ 2.78
SSBP3-204ENST00000371320 A0A0U1RQJ8 604 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 PPP1R11O60927 126 aaPredicted RBP32.4■■■□□ 2.78
SSBP3-204ENST00000371320 MMP10P09238 476 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 CNNM4Q6P4Q7 775 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 ATRIPQ8WXE1 791 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 CDK5RAP3Q96JB5 506 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 STK17AQ9UEE5 414 aa32.4■■■□□ 2.78
SSBP3-204ENST00000371320 FCER1AP12319 257 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 SLC16A2P36021 539 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 ACRBPQ8NEB7 543 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 AKT1S1Q96B36 256 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 EHD4Q9H223 541 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 PDIA5Q14554 519 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 UBE2SQ16763 222 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 ANKRD40Q6AI12 368 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 KCTD1Q719H9 257 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 CUL5Q93034 780 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 CCDC17Q96LX7 622 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 DBNDD1Q9H9R9 158 aa32.39■■■□□ 2.78
SSBP3-204ENST00000371320 DNM2P50570 870 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 PPP2R3AQ06190 1150 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 PODNQ7Z5L7 613 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 ZFPM1Q8IX07 1006 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 PNMA5Q96PV4 448 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 TUBGCP2Q9BSJ2 902 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 BLOC1S4Q9NUP1 217 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 NRXN2Q9P2S2 1712 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 TTC26A0AVF1 554 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 ZBTB5O15062 677 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 PRKCSHP14314 528 aaPredicted RBP32.38■■■□□ 2.77
SSBP3-204ENST00000371320 MRPL12P52815 198 aaKnown RBP32.38■■■□□ 2.77
SSBP3-204ENST00000371320 FAM114A1Q8IWE2 563 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 ZNF622Q969S3 477 aaKnown RBP eCLIP32.38■■■□□ 2.77
SSBP3-204ENST00000371320 ZDHHC15Q96MV8 337 aa32.38■■■□□ 2.77
SSBP3-204ENST00000371320 USP17L10C9JJH3 530 aa32.37■■■□□ 2.77
SSBP3-204ENST00000371320 PPP4R3AQ6IN85 833 aa32.37■■■□□ 2.77
SSBP3-204ENST00000371320 OR8K1Q8NGG5 319 aa32.37■■■□□ 2.77
SSBP3-204ENST00000371320 KCNQ5Q9NR82 932 aa32.37■■■□□ 2.77
SSBP3-204ENST00000371320 LUC7L2Q9Y383 392 aaKnown RBP32.37■■■□□ 2.77
SSBP3-204ENST00000371320 CLK2P49760 499 aaKnown RBP32.36■■■□□ 2.77
SSBP3-204ENST00000371320 MCM6Q14566 821 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 COBLL1Q53SF7 1204 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 ADAMTSL1Q8N6G6 1762 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 B4DLN1 442 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 SLURP2P0DP57 97 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 KRT79Q5XKE5 535 aa32.36■■■□□ 2.77
SSBP3-204ENST00000371320 LARP4BQ92615 738 aaKnown RBP32.36■■■□□ 2.77
SSBP3-204ENST00000371320 POTEMA6NI47 508 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 ZNF569Q5MCW4 686 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 MTMR8Q96EF0 704 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 CAPN11Q9UMQ6 739 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 MYMKA6NI61 221 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 KIAA0825Q8IV33 1275 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 KIAA0895Q8NCT3 520 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 SNX29Q8TEQ0 813 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 HPS3Q969F9 1004 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 EEF2KMTQ96G04 330 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 CNOT6LQ96LI5 555 aaKnown RBP32.35■■■□□ 2.77
SSBP3-204ENST00000371320 PSTPIP2Q9H939 334 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 ZNF446Q9NWS9 450 aa32.35■■■□□ 2.77
SSBP3-204ENST00000371320 CLCN6P51797 869 aa32.34■■■□□ 2.77
SSBP3-204ENST00000371320 TSR1Q2NL82 804 aaKnown RBP32.34■■■□□ 2.77
SSBP3-204ENST00000371320 FLAD1Q8NFF5 587 aa32.34■■■□□ 2.77
SSBP3-204ENST00000371320 DNAJC18Q9H819 358 aa32.34■■■□□ 2.77
SSBP3-204ENST00000371320 SLC39A2Q9NP94 309 aa32.34■■■□□ 2.77
SSBP3-204ENST00000371320 PRDM10Q9NQV6 1147 aa32.34■■■□□ 2.77
SSBP3-204ENST00000371320 ARGLU1Q9NWB6 273 aaPredicted RBP32.34■■■□□ 2.77
SSBP3-204ENST00000371320 DDX25Q9UHL0 483 aaKnown RBP32.34■■■□□ 2.77
SSBP3-204ENST00000371320 PVALEFA0A1B0GWK0 134 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 CACNB3P54284 484 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 TCP10Q12799 353 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 UNC13DQ70J99 1090 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 DNAJC7Q99615 494 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 CHP1Q99653 195 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 SLF1Q9BQI6 1058 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 DHX36Q9H2U1 1008 aaKnown RBP32.33■■■□□ 2.77
SSBP3-204ENST00000371320 PLSCR1O15162 318 aa32.33■■■□□ 2.77
SSBP3-204ENST00000371320 MTIF2P46199 727 aaKnown RBP32.33■■■□□ 2.77
SSBP3-204ENST00000371320 RAD54LQ92698 747 aa32.33■■■□□ 2.77
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms