RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 RABEP1Q15276 862 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 ANKRD1Q15327 319 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 RIOX2Q8IUF8 465 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 SRBD1Q8N5C6 995 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 REPS2Q8NFH8 660 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 MYLIPQ8WY64 445 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 RRP36Q96EU6 259 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 LZTS2Q9BRK4 669 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 RANBP17Q9H2T7 1088 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 RBM28Q9NW13 759 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 DDX20Q9UHI6 824 aaKnown RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 ZNF214Q9UL59 606 aaPredicted RBP12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 TPCN1Q9ULQ1 816 aa12.4□□□□□ -0.42
EXOSC1-203ENST00000370886 MYO9BQ13459 2157 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 RLFQ13129 1914 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 CCDC196A0A1B0GTZ2 297 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 CPLX1O14810 134 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 DTNBO60941 627 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 SLC25A27O95847 323 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 COL9A1P20849 921 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 CDC27P30260 824 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 KCTD2Q14681 263 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 SHHQ15465 462 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 SLC35G1Q2M3R5 365 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 QRICH1Q2TAL8 776 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 TJAP1Q5JTD0 557 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 TMTC3Q6ZXV5 915 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 FBXO11Q86XK2 927 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 TRERF1Q96PN7 1200 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 MMP19Q99542 508 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 MAP3K14Q99558 947 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 AGXT2Q9BYV1 514 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 SLKQ9H2G2 1235 aaPredicted RBP12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 MROH8Q9H579 483 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 RNF146Q9NTX7 359 aa12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 SEC63Q9UGP8 760 aaKnown RBP12.39□□□□□ -0.43
EXOSC1-203ENST00000370886 ZNF536O15090 1300 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 MUC3AQ02505 3323 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 ZBTB5O15062 677 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 CYTH3O43739 400 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 ST18O60284 1047 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 ICAM1P05362 532 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 FCER1AP12319 257 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 CNGA1P29973 690 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 OAZ1P54368 228 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 AKAP17AQ02040 695 aaKnown RBP12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 NSMFQ6X4W1 530 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 ANKRD35Q8N283 1001 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 FBXL16Q8N461 479 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 IL17RAQ96F46 866 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 DDX11Q96FC9 970 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 PRDM5Q9NQX1 630 aaPredicted RBP12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 ATP11BQ9Y2G3 1177 aa12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 V9GY48 417 aaPredicted RBP12.38□□□□□ -0.43
EXOSC1-203ENST00000370886 PNMA6FA0A0J9YX94 578 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 KBTBD13C9JR72 458 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 TNFRSF10AO00220 468 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 ATP2A1O14983 1001 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 PGK2P07205 417 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 PTPREP23469 700 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 COPB2P35606 906 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 MUM1L1Q5H9M0 696 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 C9orf50Q5SZB4 431 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 HEATR3Q7Z4Q2 680 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 DPP9Q86TI2 863 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 ARRDC4Q8NCT1 418 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 SHCBP1Q8NEM2 672 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 PHKBQ93100 1093 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 ZNF274Q96GC6 653 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 AMNQ9BXJ7 453 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 SLC26A6Q9BXS9 759 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 ALDH8A1Q9H2A2 487 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 TTYH1Q9H313 450 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 RIOX1Q9H6W3 641 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 ACAD9Q9H845 621 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 FAM217BQ9NTX9 383 aaPredicted RBP12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 LIMCH1Q9UPQ0 1083 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 PCDHA1Q9Y5I3 950 aa12.37□□□□□ -0.43
EXOSC1-203ENST00000370886 PTPDC1A2A3K4 754 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 SLC15A5A6NIM6 579 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 PPP1R11O60927 126 aaPredicted RBP12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 ADORA2AP29274 412 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 EVCP57679 992 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 ME3Q16798 604 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 CPLX2Q6PUV4 134 aaKnown RBP12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 CHST13Q8NET6 341 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 SPZ1Q9BXG8 430 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 FBXO40Q9UH90 709 aa12.36□□□□□ -0.43
EXOSC1-203ENST00000370886 NFIBO00712 420 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 STRNO43815 780 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 PFKFB2O60825 505 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 LARGE1O95461 756 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 HOXC6P09630 235 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 CALML3P27482 149 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 RCAN1P53805 252 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 SCRN1Q12765 414 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 PPP2R5BQ15173 497 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 TKFCQ3LXA3 575 aa12.35□□□□□ -0.43
EXOSC1-203ENST00000370886 SLC39A5Q6ZMH5 540 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms