RNA–Protein interactions for RNA: ENST00000370848.8

SS18L1-202, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best) BASIC

Gene SS18L1, Length 1,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-202ENST00000370848 RNF146Q9NTX7 359 aa17.73■□□□□ 0.43
SS18L1-202ENST00000370848 GNEQ9Y223 722 aaKnown RBP17.73■□□□□ 0.43
SS18L1-202ENST00000370848 SOWAHBA6NEL2 793 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 DCDC2CA8MYV0 355 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 IFIT3O14879 490 aaKnown RBP17.72■□□□□ 0.43
SS18L1-202ENST00000370848 PQBP1O60828 265 aaKnown RBP17.72■□□□□ 0.43
SS18L1-202ENST00000370848 ASGR1P07306 291 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 CNTN2Q02246 1040 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 ZNF543Q08ER8 600 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 IFIT1BQ5T764 474 aaKnown RBP17.72■□□□□ 0.43
SS18L1-202ENST00000370848 CCDC174Q6PII3 467 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 AGBL1Q96MI9 1066 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 GLT1D1Q96MS3 346 aa17.72■□□□□ 0.43
SS18L1-202ENST00000370848 RANBP17Q9H2T7 1088 aaKnown RBP17.72■□□□□ 0.43
SS18L1-202ENST00000370848 ASB14A6NK59 587 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 DLL1O00548 723 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 TIMP1P01033 207 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 ICAM1P05362 532 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 RAG1P15918 1043 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 FPGSQ05932 587 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 RASIP1Q5U651 963 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 SYDE2Q5VT97 1194 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 FAM126BQ8IXS8 530 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 SEZ6LQ9BYH1 1024 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 UBA5Q9GZZ9 404 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 TTYH1Q9H313 450 aaPredicted RBP17.71■□□□□ 0.43
SS18L1-202ENST00000370848 SEMA6BQ9H3T3 888 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 SPC25Q9HBM1 224 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 TMEM39AQ9NV64 488 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 CYP39A1Q9NYL5 469 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 Q9Y3F1 56 aa17.71■□□□□ 0.43
SS18L1-202ENST00000370848 A0A0U1RQG5 324 aaPredicted RBP17.7■□□□□ 0.42
SS18L1-202ENST00000370848 ARVCFO00192 962 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 PRC1O43663 620 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 CD4P01730 458 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 C6orf222P0C671 652 aaPredicted RBP17.7■□□□□ 0.42
SS18L1-202ENST00000370848 IRX5P78411 483 aaPredicted RBP17.7■□□□□ 0.42
SS18L1-202ENST00000370848 ADCK5Q3MIX3 580 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 TMEM67Q5HYA8 995 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 MFSD5Q6N075 450 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 TRERF1Q96PN7 1200 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 LRRC2Q9BYS8 371 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 HOMER2Q9NSB8 354 aa17.7■□□□□ 0.42
SS18L1-202ENST00000370848 CABYRO75952 493 aa17.69■□□□□ 0.42
SS18L1-202ENST00000370848 WTAPQ15007 396 aa17.69■□□□□ 0.42
SS18L1-202ENST00000370848 IGDCC4Q8TDY8 1250 aa17.69■□□□□ 0.42
SS18L1-202ENST00000370848 CDX2Q99626 313 aaPredicted RBP17.69■□□□□ 0.42
SS18L1-202ENST00000370848 TNFAIP2Q03169 654 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 MUM1L1Q5H9M0 696 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 GNASQ5JWF2 1037 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 RNF20Q5VTR2 975 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 TAPT1Q6NXT6 567 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 STAG2Q8N3U4 1231 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 RNPC3Q96LT9 517 aaKnown RBP17.68■□□□□ 0.42
SS18L1-202ENST00000370848 TCEANC2Q96MN5 208 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 LY9Q9HBG7 655 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 VTA1Q9NP79 307 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 PNMA2Q9UL42 364 aa17.68■□□□□ 0.42
SS18L1-202ENST00000370848 C11orf97A0A1B0GVM6 126 aaPredicted RBP17.67■□□□□ 0.42
SS18L1-202ENST00000370848 ERICH2A1L162 156 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 SH2B2O14492 632 aaPredicted RBP17.67■□□□□ 0.42
SS18L1-202ENST00000370848 ALAS1P13196 640 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 HSPA4P34932 840 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 GPATCH4Q5T3I0 446 aaKnown RBP17.67■□□□□ 0.42
SS18L1-202ENST00000370848 IQSEC1Q6DN90 963 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 MYL10Q9BUA6 226 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 MAF1Q9H063 256 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 WDR19Q8NEZ3 1342 aa17.67■□□□□ 0.42
SS18L1-202ENST00000370848 RBM47A0AV96 593 aaKnown RBP17.66■□□□□ 0.42
SS18L1-202ENST00000370848 REC8O95072 547 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 PARP1P09874 1014 aaKnown RBP17.66■□□□□ 0.42
SS18L1-202ENST00000370848 CPA1P15085 419 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 MCM5P33992 734 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 SART3Q15020 963 aaKnown RBP17.66■□□□□ 0.42
SS18L1-202ENST00000370848 SLC35G1Q2M3R5 365 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 ASPRV1Q53RT3 343 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 C16orf59Q7L2K0 433 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 TLK2Q86UE8 772 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 RAB11FIP4Q86YS3 637 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.66■□□□□ 0.42
SS18L1-202ENST00000370848 KCNB2Q92953 911 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 NEK1Q96PY6 1258 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 MAD2L2Q9UI95 211 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 CCPG1Q9ULG6 757 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 SNX14Q9Y5W7 946 aa17.66■□□□□ 0.42
SS18L1-202ENST00000370848 CHD7Q9P2D1 2997 aa17.65■□□□□ 0.42
SS18L1-202ENST00000370848 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-202ENST00000370848 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.65■□□□□ 0.42
SS18L1-202ENST00000370848 SMPD1P17405 629 aa17.65■□□□□ 0.42
SS18L1-202ENST00000370848 PPIGQ13427 754 aaKnown RBP eCLIP17.65■□□□□ 0.428e-8■□□□□ 10.9
SS18L1-202ENST00000370848 GRM4Q14833 912 aa17.65■□□□□ 0.42
SS18L1-202ENST00000370848 TSGA10IPQ3SY00 556 aa17.65■□□□□ 0.42
SS18L1-202ENST00000370848 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.65■□□□□ 0.421e-8■■■■■ 30.7
SS18L1-202ENST00000370848 GRIN2DO15399 1336 aa17.65■□□□□ 0.42
SS18L1-202ENST00000370848 MUC3AQ02505 3323 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 TLR3O15455 904 aaKnown RBP17.64■□□□□ 0.41
SS18L1-202ENST00000370848 EDNRBP24530 442 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 TROAPQ12815 778 aa17.64■□□□□ 0.41
SS18L1-202ENST00000370848 FSCN1Q16658 493 aaKnown RBP17.64■□□□□ 0.41
SS18L1-202ENST00000370848 TMEM240Q5SV17 173 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms