RNA–Protein interactions for RNA: ENST00000369709.3

RAP1A-202, Transcript of RAP1A, member of RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAP1A, Length 5,024 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAP1A-202ENST00000369709 FBXO2Q9UK22 296 aaPredicted RBP13.59□□□□□ -0.23
RAP1A-202ENST00000369709 UBE2Q2LH0YL09 131 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 PFDN1O60925 122 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 ABCB4P21439 1286 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 TXKP42681 527 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 SCTRP47872 440 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 KLK7P49862 253 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 SLC30A9Q6PML9 568 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 UBN2Q6ZU65 1347 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 IGSF1Q8N6C5 1336 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 NBPF3Q9H094 633 aa13.59□□□□□ -0.23
RAP1A-202ENST00000369709 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.59□□□□□ -0.23
RAP1A-202ENST00000369709 TRIM37O94972 964 aa13.58□□□□□ -0.23
RAP1A-202ENST00000369709 CD44P16070 742 aaKnown RBP13.58□□□□□ -0.23
RAP1A-202ENST00000369709 TBC1D10CQ8IV04 446 aa13.58□□□□□ -0.23
RAP1A-202ENST00000369709 CNOT10Q9H9A5 744 aaKnown RBP13.58□□□□□ -0.23
RAP1A-202ENST00000369709 HOMER3Q9NSC5 361 aa13.58□□□□□ -0.23
RAP1A-202ENST00000369709 CCDC169A6NNP5 214 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 GJC1P36383 396 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 FAM69CQ0P6D2 419 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 FOXP4Q8IVH2 680 aaPredicted RBP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 SPDYE1Q8NFV5 336 aaPredicted RBP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 STAMBPL1Q96FJ0 436 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 SDAD1Q9NVU7 687 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 FBXL5Q9UKA1 691 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 KDM7AQ6ZMT4 941 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 CCDC105Q8IYK2 499 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 IFNL3Q8IZI9 196 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 TMX4Q9H1E5 349 aaPredicted RBP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 SPDYE3A6NKU9 549 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 GLE1Q53GS7 698 aaKnown RBP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 ZNF449Q6P9G9 518 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 TBC1D5Q92609 795 aa13.58□□□□□ -0.24
RAP1A-202ENST00000369709 AATFQ9NY61 560 aaKnown RBP eCLIP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.58□□□□□ -0.24
RAP1A-202ENST00000369709 ANP32DO95626 131 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 CALM1P0DP23 149 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 CALM2P0DP24 149 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 CALM3P0DP25 149 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 LRRC14Q15048 493 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 PREPLQ4J6C6 727 aaPredicted RBP13.57□□□□□ -0.24
RAP1A-202ENST00000369709 RASGRP4Q8TDF6 673 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 U2AF1L4Q8WU68 220 aaKnown RBP13.57□□□□□ -0.24
RAP1A-202ENST00000369709 PIK3R5Q8WYR1 880 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 LBHD1Q9BQE6 289 aaPredicted RBP13.57□□□□□ -0.24
RAP1A-202ENST00000369709 MAGEB6P1A0A0J9YX57 407 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 FSBPO95073 299 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 ATP5DP30049 168 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 TTMPQ5BVD1 217 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 IFNL2Q8IZJ0 200 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 VPS52Q8N1B4 723 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 MDM1Q8TC05 714 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 P2RX5Q93086 422 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 NUGGCQ68CJ6 796 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 ZNF365Q70YC5 407 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 BATF3Q9NR55 127 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 ZSWIM5Q9P217 1185 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 FAM205CA6NFA0 338 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 OPLAHO14841 1288 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 SEL1L2Q5TEA6 688 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 RETREG2Q8NC44 543 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 PLBD2Q8NHP8 589 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 GPKOWQ92917 476 aaPredicted RBP eCLIP13.57□□□□□ -0.247e-8■■□□□ 13
RAP1A-202ENST00000369709 AZI2Q9H6S1 392 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 SCOCQ9UIL1 159 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 PTPN22Q9Y2R2 807 aa13.57□□□□□ -0.24
RAP1A-202ENST00000369709 IGKV5-2P06315 115 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 GSTA5Q7RTV2 222 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 ZNF444Q8N0Y2 327 aaPredicted RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 ZNF496Q96IT1 587 aaPredicted RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 THAP9Q9H5L6 903 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 INTUQ9ULD6 942 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 L3MBTL1Q9Y468 752 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 hCG_2014768A0A024R1R8 64 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 LRRC53A6NM62 1247 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 OPHN1O60890 802 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 BIRC3Q13489 604 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 TMEM139Q8IV31 216 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 TSEN2Q8NCE0 465 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 DDX47Q9H0S4 455 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 ASIC3Q9UHC3 531 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 MCM8Q9UJA3 840 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 TXNDC9O14530 226 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 PSEN1P49768 467 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 PLCB4Q15147 1175 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 DZIP3Q86Y13 1208 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 FAM133AQ8N9E0 248 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 NAP1L3Q99457 506 aaPredicted RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 DDX23Q9BUQ8 820 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 TCEAL9Q9UHQ7 104 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 AMFRQ9UKV5 643 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 PGRMC1O00264 195 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 HERVK_113P62684 666 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 KRT79Q5XKE5 535 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 DDX42Q86XP3 938 aaKnown RBP eCLIP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 ABTB1Q969K4 478 aaPredicted RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 LIMA1Q9UHB6 759 aaKnown RBP13.56□□□□□ -0.24
RAP1A-202ENST00000369709 CAPN11Q9UMQ6 739 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 NEDD4P46934 1319 aa13.56□□□□□ -0.24
RAP1A-202ENST00000369709 LRRC41Q15345 812 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms