RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 SF3A3Q12874 501 aaKnown RBP eCLIP13.66□□□□□ -0.221e-9■■■■□ 22.2
PHGDH-201ENST00000369407 INF2Q27J81 1249 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 RPAINQ86UA6 219 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 TRIM58Q8NG06 486 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 CARD10Q9BWT7 1032 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 MYH10P35580 1976 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 MYH13Q9UKX3 1938 aa13.66□□□□□ -0.22
PHGDH-201ENST00000369407 PDE8AO60658 829 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 USO1O60763 962 aaKnown RBP13.65□□□□□ -0.22
PHGDH-201ENST00000369407 IFT88Q13099 833 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 MIIPQ5JXC2 388 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 DTHD1Q6ZMT9 781 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 RRAGAQ7L523 313 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 CCDC170Q8IYT3 715 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 C4orf32Q8N8J7 132 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 PRPF38AQ8NAV1 312 aaKnown RBP13.65□□□□□ -0.22
PHGDH-201ENST00000369407 KCPQ6ZWJ8 1503 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 TNS3Q68CZ2 1445 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 FRMD3A2A2Y4 597 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 USP17L12C9JPN9 530 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 USP17L21D6R901 530 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 SSBP05455 408 aaKnown RBP eCLIP13.65□□□□□ -0.22
PHGDH-201ENST00000369407 LSP1P33241 339 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 GYG1P46976 350 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 ASIC1P78348 528 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 HDLBPQ00341 1268 aaKnown RBP13.65□□□□□ -0.22
PHGDH-201ENST00000369407 SWT1Q5T5J6 900 aaKnown RBP13.65□□□□□ -0.22
PHGDH-201ENST00000369407 CFAP58Q5T655 872 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 GBP6Q6ZN66 633 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 MTMR8Q96EF0 704 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 SLC39A2Q9NP94 309 aa13.65□□□□□ -0.22
PHGDH-201ENST00000369407 FTCDO95954 541 aa13.65□□□□□ -0.23
PHGDH-201ENST00000369407 CYP2D6P10635 497 aa13.65□□□□□ -0.23
PHGDH-201ENST00000369407 NAA35Q5VZE5 725 aa13.65□□□□□ -0.23
PHGDH-201ENST00000369407 POTEDQ86YR6 584 aa13.65□□□□□ -0.23
PHGDH-201ENST00000369407 FNBP4Q8N3X1 1017 aaPredicted RBP13.65□□□□□ -0.23
PHGDH-201ENST00000369407 GIMAP8Q8ND71 665 aaPredicted RBP13.65□□□□□ -0.23
PHGDH-201ENST00000369407 PPANQ9NQ55 473 aaKnown RBP13.65□□□□□ -0.23
PHGDH-201ENST00000369407 ZBTB1Q9Y2K1 713 aa13.65□□□□□ -0.23
PHGDH-201ENST00000369407 MYH6P13533 1939 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 PNPLA7Q6ZV29 1317 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 C1orf167Q5SNV9 1468 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 ATP2C2O75185 946 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 PAFAH1B1P43034 410 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 MAGEA1P43355 309 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 FNTAP49354 379 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 P2RX5Q93086 422 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 PRDM11Q9NQV5 511 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 HYOU1Q9Y4L1 999 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 KAT6BQ8WYB5 2073 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 A0A0G2JS52 829 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 LRRC53A6NM62 1247 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 MEFVO15553 781 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-201ENST00000369407 HEXIM1O94992 359 aaKnown RBP13.64□□□□□ -0.23
PHGDH-201ENST00000369407 LONP1P36776 959 aaKnown RBP13.64□□□□□ -0.23
PHGDH-201ENST00000369407 SLC1A4P43007 532 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 ACTN3Q08043 901 aaPredicted RBP13.64□□□□□ -0.23
PHGDH-201ENST00000369407 MAATS1Q7Z4T9 603 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 OR2W6PQ8NHA6 318 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 PIGBQ92521 554 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 TLR10Q9BXR5 811 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 DONSONQ9NYP3 566 aa13.64□□□□□ -0.23
PHGDH-201ENST00000369407 BCCIPQ9P287 314 aaKnown RBP eCLIP13.64□□□□□ -0.23
PHGDH-201ENST00000369407 PLCG1P19174 1290 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 BIRC2Q13490 618 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 KRT12Q99456 494 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 CPVLQ9H3G5 476 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 NLRC4Q9NPP4 1024 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 JAG2Q9Y219 1238 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 FAM170AA1A519 330 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 STARD3NLO95772 234 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 ARID5AQ03989 594 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 LRCH2Q5VUJ6 765 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 BLIDQ8IZY5 108 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 STAG2Q8N3U4 1231 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 GIMAP7Q8NHV1 300 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 ZNF473Q8WTR7 871 aaKnown RBP13.63□□□□□ -0.23
PHGDH-201ENST00000369407 CABS1Q96KC9 395 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 RBM28Q9NW13 759 aaKnown RBP13.63□□□□□ -0.23
PHGDH-201ENST00000369407 MROH5Q6ZUA9 1318 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 MYH2Q9UKX2 1941 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 E7EVH7 732 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 SKOR1P84550 965 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 TDRD12Q587J7 1177 aaKnown RBP13.63□□□□□ -0.23
PHGDH-201ENST00000369407 EMBQ6PCB8 327 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.63□□□□□ -0.23
PHGDH-201ENST00000369407 DNAAF5Q86Y56 855 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 KLHL7Q8IXQ5 586 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 NUP58Q9BVL2 599 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 KANSL2Q9H9L4 492 aa13.63□□□□□ -0.23
PHGDH-201ENST00000369407 CHD4Q14839 1912 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 CCDC194A0A1B0GVG4 234 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 RHOBTB3O94955 611 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 NR1D1P20393 614 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 ALS2CLQ60I27 953 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 B4GALNT4Q76KP1 1039 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 RNF217Q8TC41 542 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 ALS2CR12Q96Q35 445 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 TSGA10Q9BZW7 698 aa13.62□□□□□ -0.23
PHGDH-201ENST00000369407 NEBLO76041 1014 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms