RNA–Protein interactions for RNA: ENST00000369208.7

SIM1-202, Transcript of SIM bHLH transcription factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIM1, Length 8,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIM1-202ENST00000369208 CROCCP3Q8IVE0 287 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 SLC17A8Q8NDX2 589 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 MRPL11Q9Y3B7 192 aaKnown RBP10.97□□□□□ -0.65
SIM1-202ENST00000369208 MSL3P1P0C860 447 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 TSC22D1Q15714 1073 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 PKD2L1Q9P0L9 805 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 TCHHQ07283 1943 aa10.97□□□□□ -0.65
SIM1-202ENST00000369208 FAM160B1Q5W0V3 765 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 EFHD1Q9BUP0 239 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 NT5C3AQ9H0P0 336 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 AP5M1Q9H0R1 490 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 GID8Q9NWU2 228 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 MTHFSDQ2M296 383 aaKnown RBP10.96□□□□□ -0.65
SIM1-202ENST00000369208 GADL1Q6ZQY3 521 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.96□□□□□ -0.65
SIM1-202ENST00000369208 TRAF5O00463 557 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 HDAC4P56524 1084 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 ITIH3Q06033 890 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 PRPF38AQ8NAV1 312 aaKnown RBP10.96□□□□□ -0.65
SIM1-202ENST00000369208 HMGB3O15347 200 aaKnown RBP10.96□□□□□ -0.65
SIM1-202ENST00000369208 AHCYL1O43865 530 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 DIAPH2O60879 1101 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 NR1D1P20393 614 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 TSPY1Q01534 308 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 LGSNQ5TDP6 509 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 SERPINA10Q9UK55 444 aa10.96□□□□□ -0.65
SIM1-202ENST00000369208 ZBTB22O15209 634 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 SDSP20132 328 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 MMP14P50281 582 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 USP14P54578 494 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 ODR4Q5SWX8 454 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 SLC52A2Q9HAB3 445 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 TNFAIP3P21580 790 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 TUBA1BP68363 451 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 DNM1Q05193 864 aaKnown RBP10.96□□□□□ -0.66
SIM1-202ENST00000369208 MYO1EQ12965 1108 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 TUBA1AQ71U36 451 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 C17orf53Q8N3J3 647 aaPredicted RBP10.96□□□□□ -0.66
SIM1-202ENST00000369208 TMCO5AQ8N6Q1 288 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 ZBTB10Q96DT7 871 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 COQ7Q99807 217 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 ATP10BO94823 1461 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 NUGGCQ68CJ6 796 aa10.96□□□□□ -0.66
SIM1-202ENST00000369208 KRT6AP02538 564 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 KRT6BP04259 564 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 KRT8P05787 483 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 S100A1P23297 94 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 CPXCR1Q8N123 301 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 DEPTORQ8TB45 409 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 TRIM55Q9BYV6 548 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 TRAPPC8Q9Y2L5 1435 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 RAPGEF1Q13905 1077 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 NUDCD3Q8IVD9 361 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 APPBP2Q92624 585 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 TLDC2A0PJX2 215 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 SPOPO43791 374 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 IL9RQ01113 521 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 TNIP2Q8NFZ5 429 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 MEIS3Q99687 375 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 HNRNPH1P31943 449 aaKnown RBP10.95□□□□□ -0.66
SIM1-202ENST00000369208 ECE1P42892 770 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 MRPS15P82914 257 aaKnown RBP10.95□□□□□ -0.66
SIM1-202ENST00000369208 PDE4DQ08499 809 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 KCTD2Q14681 263 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 ATP11CQ8NB49 1132 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 BLMP54132 1417 aaPredicted RBP10.95□□□□□ -0.66
SIM1-202ENST00000369208 XPO1O14980 1071 aaKnown RBP10.95□□□□□ -0.66
SIM1-202ENST00000369208 APOA1P02647 267 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 STAT2P52630 851 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 GLE1Q53GS7 698 aaKnown RBP10.95□□□□□ -0.66
SIM1-202ENST00000369208 IGSF22Q8N9C0 903 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 MAIP1Q8WWC4 291 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 LRFN2Q9ULH4 789 aa10.95□□□□□ -0.66
SIM1-202ENST00000369208 STRNO43815 780 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 FANCCQ00597 558 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 FAM129AQ9BZQ8 928 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 SHANK2Q9UPX8 1470 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 NONOQ15233 471 aaKnown RBP eCLIP10.94□□□□□ -0.66
SIM1-202ENST00000369208 DCUN1D2Q6PH85 259 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 MIEF2Q96C03 454 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 TYW1Q9NV66 732 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 ADD3Q9UEY8 706 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 ARHGAP42A6NI28 874 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 F8W8V4 182 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 IPO5O00410 1097 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 WDR46O15213 610 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 MAPK13O15264 365 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 BRD1O95696 1058 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 PRKG1Q13976 671 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 CC2D2BQ6DHV5 1058 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 DPP9Q86TI2 863 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 HORMAD1Q86X24 394 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 PAGR1Q9BTK6 254 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 POLR3AO14802 1390 aaPredicted RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 SYCE1LA8MT33 242 aa10.94□□□□□ -0.66
SIM1-202ENST00000369208 SYF2O95926 243 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 ST13P50502 369 aaKnown RBP10.94□□□□□ -0.66
SIM1-202ENST00000369208 AP2B1P63010 937 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms