RNA–Protein interactions for RNA: ENST00000368759.5

BCCIP-203, Transcript of BRCA2 and CDKN1A interacting protein, humanhuman

TSL 1 (best) BASIC

Gene BCCIP, Length 1,433 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIP-203ENST00000368759 PDHBP11177 359 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 TOP1P11387 765 aaKnown RBP15.36■□□□□ 0.05
BCCIP-203ENST00000368759 HAND2P61296 217 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 NMIQ13287 307 aaPredicted RBP15.36■□□□□ 0.05
BCCIP-203ENST00000368759 DUSP28Q4G0W2 176 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 KIAA1211Q6ZU35 1233 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 GPCPD1Q9NPB8 672 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 TOMM22Q9NS69 142 aa15.36■□□□□ 0.05
BCCIP-203ENST00000368759 CCL23P55773 120 aa15.35■□□□□ 0.05
BCCIP-203ENST00000368759 HDAC1Q13547 482 aaPredicted RBP15.35■□□□□ 0.05
BCCIP-203ENST00000368759 ADGRE1Q14246 886 aa15.35■□□□□ 0.05
BCCIP-203ENST00000368759 MCMDC2Q4G0Z9 681 aa15.35■□□□□ 0.05
BCCIP-203ENST00000368759 PRDM12Q9H4Q4 367 aa15.35■□□□□ 0.05
BCCIP-203ENST00000368759 YBX2Q9Y2T7 364 aaKnown RBP15.35■□□□□ 0.05
BCCIP-203ENST00000368759 RBM47A0AV96 593 aaKnown RBP15.34■□□□□ 0.05
BCCIP-203ENST00000368759 SNHG28P0DPA3 235 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 OTOP2Q7RTS6 562 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 ALDH8A1Q9H2A2 487 aaPredicted RBP15.34■□□□□ 0.05
BCCIP-203ENST00000368759 NKX2-4Q9H2Z4 354 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 CCDC171Q6TFL3 1326 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 SCN10AQ9Y5Y9 1956 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 LAMA4Q16363 1823 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 CHD9Q3L8U1 2897 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 PTPDC1A2A3K4 754 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 ZEB2O60315 1214 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 FGBP02675 491 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 CALML3P27482 149 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 PURAQ00577 322 aaKnown RBP15.34■□□□□ 0.05
BCCIP-203ENST00000368759 ZNF543Q08ER8 600 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 SCLYQ96I15 445 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 WDR11Q9BZH6 1224 aa15.34■□□□□ 0.05
BCCIP-203ENST00000368759 TRMT13Q9NUP7 481 aaKnown RBP15.34■□□□□ 0.05
BCCIP-203ENST00000368759 ADD3Q9UEY8 706 aaKnown RBP15.34■□□□□ 0.05
BCCIP-203ENST00000368759 NEDD4P46934 1319 aa15.33■□□□□ 0.05
BCCIP-203ENST00000368759 MUC3AQ02505 3323 aa15.33■□□□□ 0.05
BCCIP-203ENST00000368759 SCN5AQ14524 2016 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 EDNRBP24530 442 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 RPS6P62753 249 aaKnown RBP15.33■□□□□ 0.04
BCCIP-203ENST00000368759 RAB30Q15771 203 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 AKNAD1Q5T1N1 836 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 RNF207Q6ZRF8 634 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 PPP1R13LQ8WUF5 828 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 COPS5Q92905 334 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 SEZ6LQ9BYH1 1024 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 LNPKQ9C0E8 428 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 CPVLQ9H3G5 476 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 WDR19Q8NEZ3 1342 aa15.33■□□□□ 0.04
BCCIP-203ENST00000368759 LOC102724159A0A0B4J2E5 919 aa15.32■□□□□ 0.04
BCCIP-203ENST00000368759 CYP2C9P11712 490 aa15.32■□□□□ 0.04
BCCIP-203ENST00000368759 RABGGTBP53611 331 aa15.32■□□□□ 0.04
BCCIP-203ENST00000368759 PWP2Q15269 919 aaKnown RBP15.32■□□□□ 0.04
BCCIP-203ENST00000368759 ZKSCAN3Q9BRR0 538 aa15.32■□□□□ 0.04
BCCIP-203ENST00000368759 ZBTB47Q9UFB7 747 aaPredicted RBP15.32■□□□□ 0.04
BCCIP-203ENST00000368759 CHD7Q9P2D1 2997 aa15.32■□□□□ 0.04
BCCIP-203ENST00000368759 TANC1Q9C0D5 1861 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 ARIH2O95376 493 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 MYL3P08590 195 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 GOLGA8HP0CJ92 632 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 MYOGP15173 224 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 MFSD6Q6ZSS7 791 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 TICAM2Q86XR7 235 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 OR6J1Q8NGC5 347 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 PPM1EQ8WY54 764 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 TTC14Q96N46 770 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 GAS2L1Q99501 681 aaPredicted RBP15.31■□□□□ 0.04
BCCIP-203ENST00000368759 POLR3EQ9NVU0 708 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 TNKSO95271 1327 aa15.31■□□□□ 0.04
BCCIP-203ENST00000368759 TRIM6-TRIM34B2RNG4 842 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
BCCIP-203ENST00000368759 SDSP20132 328 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 CPT1AP50416 773 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 TTLL4Q14679 1199 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 TJAP1Q5JTD0 557 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 MTG1Q9BT17 334 aaPredicted RBP15.3■□□□□ 0.04
BCCIP-203ENST00000368759 MTIF3Q9H2K0 278 aaKnown RBP15.3■□□□□ 0.04
BCCIP-203ENST00000368759 MSRAQ9UJ68 235 aa15.3■□□□□ 0.04
BCCIP-203ENST00000368759 MYO9BQ13459 2157 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 TTC28Q96AY4 2481 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 PDE4DQ08499 809 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 PPP2R5BQ15173 497 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 NBPF20Q3BBV1 942 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 USH1GQ495M9 461 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 DNERQ8NFT8 737 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 TBC1D5Q92609 795 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 RILPL2Q969X0 211 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 UBA5Q9GZZ9 404 aa15.29■□□□□ 0.04
BCCIP-203ENST00000368759 A6NJR5 290 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 PLEKHM2Q8IWE5 1019 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 SMC5Q8IY18 1101 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 SCFD2Q8WU76 684 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 SLC28A3Q9HAS3 691 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 COL20A1Q9P218 1284 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 SLC4A7Q9Y6M7 1214 aa15.28■□□□□ 0.04
BCCIP-203ENST00000368759 ZBBXA8MT70 800 aa15.27■□□□□ 0.04
BCCIP-203ENST00000368759 NKRFO15226 690 aaKnown RBP eCLIP15.27■□□□□ 0.04
BCCIP-203ENST00000368759 CCDC85BQ15834 202 aaPredicted RBP15.27■□□□□ 0.04
BCCIP-203ENST00000368759 CDC37Q16543 378 aaPredicted RBP15.27■□□□□ 0.04
BCCIP-203ENST00000368759 GPATCH4Q5T3I0 446 aaKnown RBP15.27■□□□□ 0.04
BCCIP-203ENST00000368759 CCDC62Q6P9F0 684 aa15.27■□□□□ 0.04
BCCIP-203ENST00000368759 DEFB128Q7Z7B8 93 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms