RNA–Protein interactions for RNA: ENST00000368687.1

CHTOP-202, Transcript of chromatin target of PRMT1, humanhuman

TSL 1 (best) BASIC

Gene CHTOP, Length 1,094 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-202ENST00000368687 ACVR2BQ13705 512 aa21.44■■□□□ 1.02
CHTOP-202ENST00000368687 MORC4Q8TE76 937 aa21.44■■□□□ 1.02
CHTOP-202ENST00000368687 ZHX1Q9UKY1 873 aaPredicted RBP21.44■■□□□ 1.02
CHTOP-202ENST00000368687 CYP46A1Q9Y6A2 500 aa21.44■■□□□ 1.02
CHTOP-202ENST00000368687 SOWAHBA6NEL2 793 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 DNM1LO00429 736 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 ALDH5A1P51649 535 aaPredicted RBP21.43■■□□□ 1.02
CHTOP-202ENST00000368687 GHRHRQ02643 423 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 PRAMEF19Q5SWL8 479 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 SLC30A10Q6XR72 485 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 RUFY3Q7L099 469 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 PIGSQ96S52 555 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 AGXT2Q9BYV1 514 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 VTA1Q9NP79 307 aa21.43■■□□□ 1.02
CHTOP-202ENST00000368687 KLF18A0A0U1RQI7 1052 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 LRRC37A2A6NM11 1700 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 COL9A3Q14050 684 aaPredicted RBP21.42■■□□□ 1.02
CHTOP-202ENST00000368687 RTN1Q16799 776 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 Q6ZUG5 572 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 TMTC3Q6ZXV5 915 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 TCEANC2Q96MN5 208 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 ZSWIM6Q9HCJ5 1215 aa21.42■■□□□ 1.02
CHTOP-202ENST00000368687 KBTBD13C9JR72 458 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 TAL1P17542 331 aaPredicted RBP21.41■■□□□ 1.02
CHTOP-202ENST00000368687 RNF180Q86T96 592 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 TEX2Q8IWB9 1127 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 NSUN6Q8TEA1 469 aaKnown RBP21.41■■□□□ 1.02
CHTOP-202ENST00000368687 DIS3LQ8TF46 1054 aaKnown RBP21.41■■□□□ 1.02
CHTOP-202ENST00000368687 PAWRQ96IZ0 340 aaKnown RBP21.41■■□□□ 1.02
CHTOP-202ENST00000368687 C11orf49Q9H6J7 331 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 SPC25Q9HBM1 224 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 XPNPEP3Q9NQH7 507 aa21.41■■□□□ 1.02
CHTOP-202ENST00000368687 NID2Q14112 1375 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 GOLGA8AA7E2F4 631 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 GOLGA8BA8MQT2 603 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 DUSP11O75319 330 aaKnown RBP21.4■■□□□ 1.02
CHTOP-202ENST00000368687 RXRAP19793 462 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 HSD17B4P51659 736 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 SLC35G1Q2M3R5 365 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 SRBD1Q8N5C6 995 aaKnown RBP21.4■■□□□ 1.02
CHTOP-202ENST00000368687 BRF1Q92994 677 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 IWS1Q96ST2 819 aa21.4■■□□□ 1.02
CHTOP-202ENST00000368687 ASTN1O14525 1302 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 hCG_1984214I3L0E3 225 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 PPP1R11O60927 126 aaPredicted RBP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 PLEKHA8P1O95397 391 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 CFBP00751 764 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 EDNRBP24530 442 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 METAP2P50579 478 aaKnown RBP eCLIP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 PDE4DQ08499 809 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 CCDC144BQ3MJ40 725 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 ZNF713Q8N859 430 aaPredicted RBP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 SYTL5Q8TDW5 730 aaPredicted RBP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 KATNBL1Q9H079 304 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 RBM27Q9P2N5 1060 aaKnown RBP21.39■■□□□ 1.01
CHTOP-202ENST00000368687 BRPF3Q9ULD4 1205 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 CEP290O15078 2479 aa21.39■■□□□ 1.01
CHTOP-202ENST00000368687 H0YGN5 161 aa21.38■■□□□ 1.01
CHTOP-202ENST00000368687 GCOM1H8Y6P7 765 aaPredicted RBP21.38■■□□□ 1.01
CHTOP-202ENST00000368687 POLR2MP0CAP2 368 aa21.38■■□□□ 1.01
CHTOP-202ENST00000368687 EVCP57679 992 aa21.38■■□□□ 1.01
CHTOP-202ENST00000368687 IQSEC1Q6DN90 963 aa21.38■■□□□ 1.01
CHTOP-202ENST00000368687 RMDN3Q96TC7 470 aa21.38■■□□□ 1.01
CHTOP-202ENST00000368687 NAP1L2Q9ULW6 460 aaPredicted RBP21.38■■□□□ 1.01
CHTOP-202ENST00000368687 COL6A1P12109 1028 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 CPA1P15085 419 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 DPF3Q92784 378 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 CUL5Q93034 780 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 IL17RAQ96F46 866 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 TSEN34Q9BSV6 310 aaKnown RBP21.37■■□□□ 1.01
CHTOP-202ENST00000368687 Q9Y3F1 56 aa21.37■■□□□ 1.01
CHTOP-202ENST00000368687 OPLAHO14841 1288 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 TNFAIP2Q03169 654 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 APOBRQ0VD83 1088 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 LRRC41Q15345 812 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 ARHGEF16Q5VV41 709 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 NR2E3Q9Y5X4 410 aa21.36■■□□□ 1.01
CHTOP-202ENST00000368687 CNTNAP5Q8WYK1 1306 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 SYNRGQ9UMZ2 1314 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 NKRFO15226 690 aaKnown RBP eCLIP21.35■■□□□ 1.01
CHTOP-202ENST00000368687 CST5P28325 142 aaPredicted RBP21.35■■□□□ 1.01
CHTOP-202ENST00000368687 ANKRD1Q15327 319 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 STXBP2Q15833 593 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 ANO1Q5XXA6 986 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 PPP1R18Q6NYC8 613 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 RAB11FIP4Q86YS3 637 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 FBXO16Q8IX29 292 aaPredicted RBP21.35■■□□□ 1.01
CHTOP-202ENST00000368687 PCSK9Q8NBP7 692 aaKnown RBP21.35■■□□□ 1.01
CHTOP-202ENST00000368687 SCFD2Q8WU76 684 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 PIBF1Q8WXW3 757 aa21.35■■□□□ 1.01
CHTOP-202ENST00000368687 UPF3AQ9H1J1 476 aaKnown RBP21.35■■□□□ 1.01
CHTOP-202ENST00000368687 MOXD2PA6NHM9 499 aa21.34■■□□□ 1.01
CHTOP-202ENST00000368687 PIK3CDO00329 1044 aa21.34■■□□□ 1.01
CHTOP-202ENST00000368687 NKX3-2P78367 333 aa21.34■■□□□ 1.01
CHTOP-202ENST00000368687 NOL8Q76FK4 1167 aaKnown RBP21.34■■□□□ 1.01
CHTOP-202ENST00000368687 PURBQ96QR8 312 aaKnown RBP21.34■■□□□ 1.01
CHTOP-202ENST00000368687 GLT8D2Q9H1C3 349 aa21.34■■□□□ 1.01
CHTOP-202ENST00000368687 PXMP2Q9NR77 195 aa21.34■■□□□ 1.01
CHTOP-202ENST00000368687 PDRG1Q9NUG6 133 aa21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms