RNA–Protein interactions for RNA: ENST00000368657.7

TUBE1-201, Transcript of tubulin epsilon 1, humanhuman

TSL 2

Gene TUBE1, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBE1-201ENST00000368657 POLR3EQ9NVU0 708 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 PTPRSQ13332 1948 aa12.64□□□□□ -0.39
TUBE1-201ENST00000368657 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.63□□□□□ -0.39
TUBE1-201ENST00000368657 SHMT1P34896 483 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 IKBKEQ14164 716 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 CERS3Q8IU89 383 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 CCDC144CPQ8IYA2 1237 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 CCDC155Q8N6L0 562 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 TET1Q8NFU7 2136 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 VCPKMTQ9H867 229 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 TMX2Q9Y320 296 aa12.63□□□□□ -0.39
TUBE1-201ENST00000368657 IL16Q14005 1332 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 MPHOSPH10O00566 681 aaKnown RBP12.62□□□□□ -0.39
TUBE1-201ENST00000368657 SDHBP21912 280 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 PTPN11Q06124 597 aaPredicted RBP12.62□□□□□ -0.39
TUBE1-201ENST00000368657 ADAM15Q13444 863 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.62□□□□□ -0.39
TUBE1-201ENST00000368657 SPICE1Q8N0Z3 855 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 REPS2Q8NFH8 660 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 KCNG4Q8TDN1 519 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 AFAP1L1Q8TED9 768 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 TEX13BQ9BXU2 312 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 USP44Q9H0E7 712 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 ARHGEF10LQ9HCE6 1279 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 PPP1R9AQ9ULJ8 1098 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 FOCADQ5VW36 1801 aa12.62□□□□□ -0.39
TUBE1-201ENST00000368657 PDGFBP01127 241 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-201ENST00000368657 LMNAP02545 664 aaKnown RBP12.61□□□□□ -0.39
TUBE1-201ENST00000368657 SMPD1P17405 629 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 USP5P45974 858 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 PSEN1P49768 467 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 HTRA4P83105 476 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-201ENST00000368657 HYAL1Q12794 435 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 PTPN21Q16825 1174 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 GORABQ5T7V8 394 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 FAM117BQ6P1L5 589 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 NFRKBQ6P4R8 1299 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 TMEM192Q8IY95 271 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 ANKRD35Q8N283 1001 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 TMEM105Q8N8V8 129 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 CAGE1Q8TC20 777 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 CHAMP1Q96JM3 812 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 PHF7Q9BWX1 381 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-201ENST00000368657 LMAN2LQ9H0V9 348 aa12.61□□□□□ -0.39
TUBE1-201ENST00000368657 GPHNQ9NQX3 736 aaPredicted RBP12.61□□□□□ -0.39
TUBE1-201ENST00000368657 EP300Q09472 2414 aaPredicted RBP12.6□□□□□ -0.39
TUBE1-201ENST00000368657 ASB14A6NK59 587 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 CXCL10P02778 98 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 GPNMBQ14956 572 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 FAM47CQ5HY64 1035 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 KIAA0319Q5VV43 1072 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 SNRNP48Q6IEG0 339 aaKnown RBP12.6□□□□□ -0.39
TUBE1-201ENST00000368657 PI16Q6UXB8 463 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 TMEM179Q6ZVK1 233 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 MSLNLQ96KJ4 702 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 FGD4Q96M96 766 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 FBXO40Q9UH90 709 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 NOD1Q9Y239 953 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 PCDHGC5Q9Y5F6 944 aa12.6□□□□□ -0.39
TUBE1-201ENST00000368657 MYH1P12882 1939 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 TBX10O75333 385 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 ARID4AP29374 1257 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-201ENST00000368657 CLCN5P51795 746 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 PURAQ00577 322 aaKnown RBP12.59□□□□□ -0.39
TUBE1-201ENST00000368657 ADGRA1Q86SQ6 560 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 WWC1Q8IX03 1113 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 NEUROD6Q96NK8 337 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 MTG1Q9BT17 334 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-201ENST00000368657 SH2B1Q9NRF2 756 aaPredicted RBP12.59□□□□□ -0.39
TUBE1-201ENST00000368657 FBXO28Q9NVF7 368 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 RIPK3Q9Y572 518 aa12.59□□□□□ -0.39
TUBE1-201ENST00000368657 ATP2A1O14983 1001 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 AMHP03971 560 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 RB1P06400 928 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 UQCRFS1P1P0C7P4 283 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 SELPP16109 830 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 MAP1BP46821 2468 aaKnown RBP12.58□□□□□ -0.4
TUBE1-201ENST00000368657 RRP1P56182 461 aaKnown RBP12.58□□□□□ -0.4
TUBE1-201ENST00000368657 COASYQ13057 564 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 PDAP1Q13442 181 aaKnown RBP12.58□□□□□ -0.4
TUBE1-201ENST00000368657 RSPO4Q2I0M5 234 aaPredicted RBP12.58□□□□□ -0.4
TUBE1-201ENST00000368657 FBXO11Q86XK2 927 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 SIAH1Q8IUQ4 282 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 SMRP1Q8NCR6 262 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 RPGRIP1Q96KN7 1286 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 HAUS7Q99871 368 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 IGFLR1Q9H665 355 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 COPRSQ9NQ92 184 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 RALYQ9UKM9 306 aaKnown RBP12.58□□□□□ -0.4
TUBE1-201ENST00000368657 MCM3APO60318 1980 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 PARP14Q460N5 1801 aa12.58□□□□□ -0.4
TUBE1-201ENST00000368657 ANKRD11Q6UB99 2663 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-201ENST00000368657 TANC1Q9C0D5 1861 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 USP17L12C9JPN9 530 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 USP17L21D6R901 530 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 KPNA6O60684 536 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 ATF7P17544 494 aaPredicted RBP12.57□□□□□ -0.4
TUBE1-201ENST00000368657 NDUFV1P49821 464 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 CPT1AP50416 773 aa12.57□□□□□ -0.4
TUBE1-201ENST00000368657 PLCD1P51178 756 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms