RNA–Protein interactions for RNA: ENST00000368648.7

EBF3-202, Transcript of early B cell factor 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene EBF3, Length 4,375 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EBF3-202ENST00000368648 PACSIN2Q9UNF0 486 aaPredicted RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 CDC42BPGQ6DT37 1551 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 TMEM131LA2VDJ0 1609 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 TBCAO75347 108 aaKnown RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 FANCBQ8NB91 859 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 TTC16Q8NEE8 873 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 STAG1Q8WVM7 1258 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 RPGRIP1Q96KN7 1286 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 GPR101Q96P66 508 aaPredicted RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 SPATS2LQ9NUQ6 558 aaKnown RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 ARHGAP23Q9P227 1491 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 ZNF804BA4D1E1 1349 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 SPOPO43791 374 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 HIP1RO75146 1068 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 RPN1P04843 607 aaKnown RBP11.89□□□□□ -0.51
EBF3-202ENST00000368648 CALM1P0DP23 149 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 CALM2P0DP24 149 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 CALM3P0DP25 149 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 POLE2P56282 527 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 SHC4Q6S5L8 630 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 MAEAQ7L5Y9 396 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 OTUD6AQ7L8S5 288 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 IFT74Q96LB3 600 aa11.89□□□□□ -0.51
EBF3-202ENST00000368648 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.89□□□□□ -0.51
EBF3-202ENST00000368648 H7C1D1 291 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TCP1P17987 556 aaKnown RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 CETN2P41208 172 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 ARHGAP44Q17R89 818 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 GNPTABQ3T906 1256 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 NFRKBQ6P4R8 1299 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 APBB1IPQ7Z5R6 666 aaPredicted RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 CCDC105Q8IYK2 499 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 CPXCR1Q8N123 301 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PAF1Q8N7H5 531 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 EHD4Q9H223 541 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 SOS2Q07890 1332 aaPredicted RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 CHUKO15111 745 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PRKAB2O43741 272 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 SKAP2O75563 359 aaPredicted RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 CALML3P27482 149 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TECP42680 631 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 DNM2P50570 870 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TBC1D22AQ8WUA7 517 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 STMN2Q93045 179 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TEKT1Q969V4 418 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 CEP63Q96MT8 703 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TRIM6Q9C030 488 aaPredicted RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 GOLGA8HP0CJ92 632 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 FXR1P51114 621 aaKnown RBP eCLIP11.88□□□□□ -0.51
EBF3-202ENST00000368648 ASIC2Q16515 512 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 C6orf163Q5TEZ5 329 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TMCO4Q5TGY1 634 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PACS2Q86VP3 889 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PICK1Q9NRD5 415 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 MYO1AQ9UBC5 1043 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 FAM184BQ9ULE4 1060 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 IKBKGQ9Y6K9 419 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 TULP4Q9NRJ4 1543 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 MYBL1P10243 752 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PDE6AP16499 860 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 EIF4A3P38919 411 aaKnown RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 SFMBT2Q5VUG0 894 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 DENND2CQ68D51 928 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 PPFIBP2Q8ND30 876 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 KLHL29Q96CT2 875 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 SPDL1Q96EA4 605 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 ELAC2Q9BQ52 826 aaKnown RBP11.88□□□□□ -0.51
EBF3-202ENST00000368648 PKD2L1Q9P0L9 805 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 SWAP70Q9UH65 585 aa11.88□□□□□ -0.51
EBF3-202ENST00000368648 RAD17O75943 681 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 EPHB4P54760 987 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 CACNB1Q02641 598 aaPredicted RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 COL9A3Q14050 684 aaPredicted RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 TXNRD1Q16881 649 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 U2AF1L4Q8WU68 220 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 LMBR1Q8WVP7 490 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 TBC1D5Q92609 795 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 RRP36Q96EU6 259 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 CNOT6LQ96LI5 555 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 CCDC77Q9BR77 488 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 LSM14BQ9BX40 385 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 NHEJ1Q9H9Q4 299 aaPredicted RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 COPRSQ9NQ92 184 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 PCDHB13Q9Y5F0 798 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 SLIT1O75093 1534 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 SPDYE3A6NKU9 549 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 TCP10L2B9ZVM9 353 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 RPS6KA4O75676 772 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 ATP2B4P23634 1241 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 PLTPP55058 493 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 POLA2Q14181 598 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 KCTD19Q17RG1 926 aaPredicted RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 MUM1Q2TAK8 710 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 IQCGQ9H095 443 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 KANSL2Q9H9L4 492 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 TBK1Q9UHD2 729 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 PTPN22Q9Y2R2 807 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 CPSF1Q10570 1443 aaKnown RBP11.87□□□□□ -0.51
EBF3-202ENST00000368648 ZMYM6O95789 1325 aa11.87□□□□□ -0.51
EBF3-202ENST00000368648 STX2P32856 288 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms