RNA–Protein interactions for RNA: ENST00000368533.7

TPM3-212, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 3,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-212ENST00000368533 QRICH1Q2TAL8 776 aa12.02□□□□□ -0.48
TPM3-212ENST00000368533 RNF181Q9P0P0 153 aa12.02□□□□□ -0.48
TPM3-212ENST00000368533 INPP5BP32019 993 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 ASPRV1Q53RT3 343 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 RASSF8Q8NHQ8 419 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 SYMPKQ92797 1274 aaKnown RBP12.02□□□□□ -0.49
TPM3-212ENST00000368533 ZKSCAN4Q969J2 545 aaPredicted RBP12.02□□□□□ -0.49
TPM3-212ENST00000368533 DEFB129Q9H1M3 183 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 ZBTB21Q9ULJ3 1066 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 COBLO75128 1261 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 ATP1A3P13637 1013 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 YBX3P16989 372 aaKnown RBP eCLIP12.02□□□□□ -0.49
TPM3-212ENST00000368533 GSDMDP57764 484 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 CDC37Q16543 378 aaPredicted RBP12.02□□□□□ -0.49
TPM3-212ENST00000368533 IL17AQ16552 155 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 GRIPAP1Q4V328 841 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 TBCKQ8TEA7 893 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 SYT17Q9BSW7 474 aa12.02□□□□□ -0.49
TPM3-212ENST00000368533 EIF4ENIF1Q9NRA8 985 aaKnown RBP12.02□□□□□ -0.49
TPM3-212ENST00000368533 PPP6R2O75170 966 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 MYCNP04198 464 aaPredicted RBP12.01□□□□□ -0.49
TPM3-212ENST00000368533 HOXA13P31271 388 aaPredicted RBP12.01□□□□□ -0.49
TPM3-212ENST00000368533 DHX8Q14562 1220 aaKnown RBP12.01□□□□□ -0.49
TPM3-212ENST00000368533 DHX37Q8IY37 1157 aaKnown RBP12.01□□□□□ -0.49
TPM3-212ENST00000368533 RIOX1Q9H6W3 641 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 FAM53CQ9NYF3 392 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 PCDHA1Q9Y5I3 950 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 FER1L6Q2WGJ9 1857 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 CUTAO60888 179 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 PTPREP23469 700 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 CALML3P27482 149 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 PLA2G4AP47712 749 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 RESP18Q5W5W9 173 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 REXO1Q8N1G1 1221 aaKnown RBP12.01□□□□□ -0.49
TPM3-212ENST00000368533 CCDC148Q8NFR7 591 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 SMARCE1Q969G3 411 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 ZNF341Q9BYN7 854 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 RASSF4Q9H2L5 321 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 C6orf50Q9HD87 102 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 GGA3Q9NZ52 723 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 FHOD1Q9Y613 1164 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 KIF13BQ9NQT8 1826 aa12.01□□□□□ -0.49
TPM3-212ENST00000368533 PLIN4Q96Q06 1357 aa12□□□□□ -0.49
TPM3-212ENST00000368533 SEC31AO94979 1220 aaKnown RBP12□□□□□ -0.49
TPM3-212ENST00000368533 TDP2O95551 362 aa12□□□□□ -0.49
TPM3-212ENST00000368533 CLCN6P51797 869 aa12□□□□□ -0.49
TPM3-212ENST00000368533 GTF2A1P52655 376 aaPredicted RBP12□□□□□ -0.49
TPM3-212ENST00000368533 UBXN2AP68543 259 aa12□□□□□ -0.49
TPM3-212ENST00000368533 FANCCQ00597 558 aa12□□□□□ -0.49
TPM3-212ENST00000368533 SLC30A10Q6XR72 485 aa12□□□□□ -0.49
TPM3-212ENST00000368533 EPC1Q9H2F5 836 aa12□□□□□ -0.49
TPM3-212ENST00000368533 SNHG28P0DPA3 235 aa12□□□□□ -0.49
TPM3-212ENST00000368533 UBASH3AP57075 661 aa12□□□□□ -0.49
TPM3-212ENST00000368533 CCZ1BP86790 482 aa12□□□□□ -0.49
TPM3-212ENST00000368533 CCZ1P86791 482 aaPredicted RBP12□□□□□ -0.49
TPM3-212ENST00000368533 GPATCH11Q8N954 259 aa12□□□□□ -0.49
TPM3-212ENST00000368533 BLZF1Q9H2G9 400 aa12□□□□□ -0.49
TPM3-212ENST00000368533 H7C1D1 291 aa12□□□□□ -0.49
TPM3-212ENST00000368533 FZD9O00144 591 aa12□□□□□ -0.49
TPM3-212ENST00000368533 MYO1CO00159 1063 aa12□□□□□ -0.49
TPM3-212ENST00000368533 CHRM1P11229 460 aaPredicted RBP12□□□□□ -0.49
TPM3-212ENST00000368533 BMP3P12645 472 aa12□□□□□ -0.49
TPM3-212ENST00000368533 ADCY7P51828 1080 aa12□□□□□ -0.49
TPM3-212ENST00000368533 METTL16Q86W50 562 aaKnown RBP12□□□□□ -0.49
TPM3-212ENST00000368533 FCHSD1Q86WN1 690 aa12□□□□□ -0.49
TPM3-212ENST00000368533 CCAR2Q8N163 923 aaKnown RBP12□□□□□ -0.49
TPM3-212ENST00000368533 TBC1D5Q92609 795 aa12□□□□□ -0.49
TPM3-212ENST00000368533 NYAP2Q9P242 653 aa12□□□□□ -0.49
TPM3-212ENST00000368533 BRCA1P38398 1863 aaKnown RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 ATRNL1Q5VV63 1379 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 ANKRD65E5RJM6 399 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 NOP2P46087 812 aaKnown RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 NOVP48745 357 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 HIRAP54198 1017 aaPredicted RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 KARSQ15046 597 aaKnown RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 POTEDQ86YR6 584 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 LZTS2Q9BRK4 669 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 ZMYND12Q9H0C1 365 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 HOMER2Q9NSB8 354 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 CEP131Q9UPN4 1083 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 SRPRBQ9Y5M8 271 aaKnown RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 PNMA6FA0A0J9YX94 578 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 ZBTB5O15062 677 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 PNMA6AP0CW24 399 aaPredicted RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 TXKP42681 527 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 CPXCR1Q8N123 301 aa11.99□□□□□ -0.49
TPM3-212ENST00000368533 HERC5Q9UII4 1024 aaKnown RBP11.99□□□□□ -0.49
TPM3-212ENST00000368533 CAP2P40123 477 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 TECP42680 631 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 GOLGA8FQ08AF8 430 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 GOLGA8DPQ0D2H9 430 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 BMS1Q14692 1282 aaKnown RBP11.98□□□□□ -0.49
TPM3-212ENST00000368533 NONOQ15233 471 aaKnown RBP eCLIP11.98□□□□□ -0.491e-7■■■■□ 26.2
TPM3-212ENST00000368533 GPATCH4Q5T3I0 446 aaKnown RBP11.98□□□□□ -0.49
TPM3-212ENST00000368533 SMYD4Q8IYR2 804 aaPredicted RBP11.98□□□□□ -0.49
TPM3-212ENST00000368533 TEPSINQ96N21 525 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 PSTPIP2Q9H939 334 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 PCDHA5Q9Y5H7 936 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 M0R2N6 131 aa11.98□□□□□ -0.49
TPM3-212ENST00000368533 SLC37A4O43826 429 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms