RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 MAP3K14Q99558 947 aa22.06■■□□□ 1.12
CKS1B-203ENST00000368439 TSEN34Q9BSV6 310 aaKnown RBP22.06■■□□□ 1.12
CKS1B-203ENST00000368439 GNEQ9Y223 722 aaKnown RBP22.06■■□□□ 1.12
CKS1B-203ENST00000368439 TRIOBPQ9H2D6 2365 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 OPLAHO14841 1288 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 ZBTB5O15062 677 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 SYN1P17600 705 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 EDNRBP24530 442 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 RTP1P59025 263 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 C1orf53Q5VUE5 145 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 EEPD1Q7L9B9 569 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 CATIPQ7Z7H3 387 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 ZNF654Q8IZM8 581 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 AMNQ9BXJ7 453 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 VTA1Q9NP79 307 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 PPP4R2Q9NY27 417 aa22.05■■□□□ 1.12
CKS1B-203ENST00000368439 RBM27Q9P2N5 1060 aaKnown RBP22.05■■□□□ 1.12
CKS1B-203ENST00000368439 DDAH1O94760 285 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 SMPD1P17405 629 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 LIFRP42702 1097 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 GHRHRQ02643 423 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 TNFAIP2Q03169 654 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 TMEM63BQ5T3F8 832 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 RNF20Q5VTR2 975 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 DNERQ8NFT8 737 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 SYTL5Q8TDW5 730 aaPredicted RBP22.04■■□□□ 1.12
CKS1B-203ENST00000368439 PIGSQ96S52 555 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 GDF15Q99988 308 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 MYL10Q9BUA6 226 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 COL20A1Q9P218 1284 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 PCDH10Q9P2E7 1040 aa22.04■■□□□ 1.12
CKS1B-203ENST00000368439 MRPL11Q9Y3B7 192 aaKnown RBP22.04■■□□□ 1.12
CKS1B-203ENST00000368439 A0A1W2PQ45 241 aaPredicted RBP22.03■■□□□ 1.12
CKS1B-203ENST00000368439 A0A1W2PQY0 241 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 PTGS1P23219 599 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 ACLYP53396 1101 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 KCNA10Q16322 511 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 ADCK5Q3MIX3 580 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 IQSEC1Q6DN90 963 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 TMTC2Q8N394 836 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 KCNB2Q92953 911 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 LRRC2Q9BYS8 371 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 LTBP2Q14767 1821 aa22.03■■□□□ 1.12
CKS1B-203ENST00000368439 RBM47A0AV96 593 aaKnown RBP22.02■■□□□ 1.12
CKS1B-203ENST00000368439 MOXD2PA6NHM9 499 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 C6orf222P0C671 652 aaPredicted RBP22.02■■□□□ 1.12
CKS1B-203ENST00000368439 EXOSC10Q01780 885 aaKnown RBP22.02■■□□□ 1.12
CKS1B-203ENST00000368439 TRIM60Q495X7 471 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 MCF2L2Q86YR7 1114 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 NUP133Q8WUM0 1156 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 NEK1Q96PY6 1258 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 TAAR1Q96RJ0 339 aa22.02■■□□□ 1.12
CKS1B-203ENST00000368439 SGMS1Q86VZ5 419 aa22.01■■□□□ 1.11
CKS1B-203ENST00000368439 HOMER1Q86YM7 354 aa22.01■■□□□ 1.11
CKS1B-203ENST00000368439 ATP11BQ9Y2G3 1177 aa22.01■■□□□ 1.11
CKS1B-203ENST00000368439 PCDHA1Q9Y5I3 950 aa22.01■■□□□ 1.11
CKS1B-203ENST00000368439 KIAA1217Q5T5P2 1943 aa22.01■■□□□ 1.11
CKS1B-203ENST00000368439 HSD17B4P51659 736 aa22■■□□□ 1.11
CKS1B-203ENST00000368439 TLK2Q86UE8 772 aa22■■□□□ 1.11
CKS1B-203ENST00000368439 SPZ1Q9BXG8 430 aa22■■□□□ 1.11
CKS1B-203ENST00000368439 Q9Y3F1 56 aa22■■□□□ 1.11
CKS1B-203ENST00000368439 PNMA6FA0A0J9YX94 578 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 CCDC69A6NI79 296 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 CENPBP07199 599 aaPredicted RBP21.99■■□□□ 1.11
CKS1B-203ENST00000368439 ASGR1P07306 291 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 SMARCA1P28370 1054 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 BMP8BP34820 402 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 HSPA4P34932 840 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 MAGEA10P43363 369 aaPredicted RBP21.99■■□□□ 1.11
CKS1B-203ENST00000368439 BEX3Q00994 111 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 PDE4DQ08499 809 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 DUSP28Q4G0W2 176 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 GNASQ5JWF2 1037 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 NFXL1Q6ZNB6 911 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 PCSK9Q8NBP7 692 aaKnown RBP21.99■■□□□ 1.11
CKS1B-203ENST00000368439 CTCFLQ8NI51 663 aaPredicted RBP21.99■■□□□ 1.11
CKS1B-203ENST00000368439 SPC25Q9HBM1 224 aa21.99■■□□□ 1.11
CKS1B-203ENST00000368439 PLEKHA8P1O95397 391 aa21.98■■□□□ 1.11
CKS1B-203ENST00000368439 RXRAP19793 462 aa21.98■■□□□ 1.11
CKS1B-203ENST00000368439 DHX32Q7L7V1 743 aaKnown RBP21.98■■□□□ 1.11
CKS1B-203ENST00000368439 SRBD1Q8N5C6 995 aaKnown RBP21.98■■□□□ 1.11
CKS1B-203ENST00000368439 TCEANC2Q96MN5 208 aa21.98■■□□□ 1.11
CKS1B-203ENST00000368439 WDR11Q9BZH6 1224 aa21.98■■□□□ 1.11
CKS1B-203ENST00000368439 STARD7Q9NQZ5 370 aa21.98■■□□□ 1.11
CKS1B-203ENST00000368439 MAP3K20Q9NYL2 800 aaKnown RBP21.98■■□□□ 1.11
CKS1B-203ENST00000368439 DYNC1LI2O43237 492 aaPredicted RBP21.97■■□□□ 1.11
CKS1B-203ENST00000368439 CFBP00751 764 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 CALM1P0DP23 149 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 CALM2P0DP24 149 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 CALM3P0DP25 149 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 KIF5BP33176 963 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 FXR1P51114 621 aaKnown RBP eCLIP21.97■■□□□ 1.11
CKS1B-203ENST00000368439 TLE2Q04725 743 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 KRT32Q14532 448 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 NOL8Q76FK4 1167 aaKnown RBP21.97■■□□□ 1.11
CKS1B-203ENST00000368439 NSUN6Q8TEA1 469 aaKnown RBP21.97■■□□□ 1.11
CKS1B-203ENST00000368439 RMDN3Q96TC7 470 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 MPHOSPH6Q99547 160 aaKnown RBP21.97■■□□□ 1.11
CKS1B-203ENST00000368439 ELP1O95163 1332 aa21.97■■□□□ 1.11
CKS1B-203ENST00000368439 FSCN1Q16658 493 aaKnown RBP21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms