RNA–Protein interactions for RNA: ENST00000368010.3

PFDN2-201, Transcript of prefoldin subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN2, Length 677 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN2-201ENST00000368010 CALM1P0DP23 149 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 CALM2P0DP24 149 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 CALM3P0DP25 149 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 ADCYAP1R1P41586 468 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 ATN1P54259 1190 aaPredicted RBP27.77■■■□□ 2.04
PFDN2-201ENST00000368010 ADCK5Q3MIX3 580 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 DHX32Q7L7V1 743 aaKnown RBP27.77■■■□□ 2.04
PFDN2-201ENST00000368010 FBXO16Q8IX29 292 aaPredicted RBP27.77■■■□□ 2.04
PFDN2-201ENST00000368010 PHF24Q9UPV7 400 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 LRRC37A2A6NM11 1700 aa27.77■■■□□ 2.04
PFDN2-201ENST00000368010 PPP1R11O60927 126 aaPredicted RBP27.76■■■□□ 2.03
PFDN2-201ENST00000368010 HSPA4P34932 840 aa27.76■■■□□ 2.03
PFDN2-201ENST00000368010 TNFAIP2Q03169 654 aa27.76■■■□□ 2.03
PFDN2-201ENST00000368010 LZTS2Q9BRK4 669 aa27.76■■■□□ 2.03
PFDN2-201ENST00000368010 PCDHA1Q9Y5I3 950 aa27.76■■■□□ 2.03
PFDN2-201ENST00000368010 B4DLN1 442 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 HMGB1P09429 215 aaKnown RBP27.75■■■□□ 2.03
PFDN2-201ENST00000368010 GNAQP50148 359 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 MRPL12P52815 198 aaKnown RBP27.75■■■□□ 2.03
PFDN2-201ENST00000368010 PDE4DQ08499 809 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 NOL8Q76FK4 1167 aaKnown RBP27.75■■■□□ 2.03
PFDN2-201ENST00000368010 SGMS1Q86VZ5 419 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 SYTL5Q8TDW5 730 aaPredicted RBP27.75■■■□□ 2.03
PFDN2-201ENST00000368010 TBC1D5Q92609 795 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 FERMT2Q96AC1 680 aa27.75■■■□□ 2.03
PFDN2-201ENST00000368010 TSEN34Q9BSV6 310 aaKnown RBP27.75■■■□□ 2.03
PFDN2-201ENST00000368010 PNMA6FA0A0J9YX94 578 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 C11orf97A0A1B0GVM6 126 aaPredicted RBP27.74■■■□□ 2.03
PFDN2-201ENST00000368010 C6orf222P0C671 652 aaPredicted RBP27.74■■■□□ 2.03
PFDN2-201ENST00000368010 GJA9P57773 515 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 EXOSC10Q01780 885 aaKnown RBP27.74■■■□□ 2.03
PFDN2-201ENST00000368010 TAPT1Q6NXT6 567 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 SYNE3Q6ZMZ3 975 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 KLHDC9Q8NEP7 349 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 KCNB2Q92953 911 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 SPZ1Q9BXG8 430 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 UPF3AQ9H1J1 476 aaKnown RBP27.74■■■□□ 2.03
PFDN2-201ENST00000368010 PDGFCQ9NRA1 345 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 MYH6P13533 1939 aa27.74■■■□□ 2.03
PFDN2-201ENST00000368010 CFBP00751 764 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 RXRAP19793 462 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 EDNRBP24530 442 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 CST5P28325 142 aaPredicted RBP27.73■■■□□ 2.03
PFDN2-201ENST00000368010 SMARCA1P28370 1054 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 IQSEC1Q6DN90 963 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 SLC39A5Q6ZMH5 540 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 TCEANC2Q96MN5 208 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 ZMYND8Q9ULU4 1186 aaPredicted RBP27.73■■■□□ 2.03
PFDN2-201ENST00000368010 CEP290O15078 2479 aa27.73■■■□□ 2.03
PFDN2-201ENST00000368010 MYADML2A6NDP7 307 aa27.72■■■□□ 2.03
PFDN2-201ENST00000368010 MOXD2PA6NHM9 499 aa27.72■■■□□ 2.03
PFDN2-201ENST00000368010 CHRDL2Q6WN34 429 aa27.72■■■□□ 2.03
PFDN2-201ENST00000368010 MICU3Q86XE3 530 aa27.72■■■□□ 2.03
PFDN2-201ENST00000368010 RRP36Q96EU6 259 aaKnown RBP27.72■■■□□ 2.03
PFDN2-201ENST00000368010 COL20A1Q9P218 1284 aa27.72■■■□□ 2.03
PFDN2-201ENST00000368010 GNEQ9Y223 722 aaKnown RBP27.72■■■□□ 2.03
PFDN2-201ENST00000368010 A0A1W2PQ45 241 aaPredicted RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 A0A1W2PQY0 241 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 OPLAHO14841 1288 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 EPB41L2O43491 1005 aaKnown RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 SMPD1P17405 629 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 ACLYP53396 1101 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 RTP1P59025 263 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 GHRHRQ02643 423 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 TLK2Q86UE8 772 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 RAB11FIP4Q86YS3 637 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 PCSK9Q8NBP7 692 aaKnown RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 NSUN6Q8TEA1 469 aaKnown RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 PIBF1Q8WXW3 757 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 TAAR1Q96RJ0 339 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 RMDN3Q96TC7 470 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 MAP3K20Q9NYL2 800 aaKnown RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 COLQQ9Y215 455 aaPredicted RBP27.71■■■□□ 2.03
PFDN2-201ENST00000368010 SNX14Q9Y5W7 946 aa27.71■■■□□ 2.03
PFDN2-201ENST00000368010 PLEKHA8P1O95397 391 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 HSD17B4P51659 736 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 SNX17Q15036 470 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 KCNA10Q16322 511 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 CCSAPQ6IQ19 270 aaPredicted RBP27.7■■■□□ 2.02
PFDN2-201ENST00000368010 SAMD3Q8N6K7 520 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 JAKMIP1Q96N16 626 aaKnown RBP27.7■■■□□ 2.02
PFDN2-201ENST00000368010 AP5M1Q9H0R1 490 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 SEC63Q9UGP8 760 aaKnown RBP27.7■■■□□ 2.02
PFDN2-201ENST00000368010 ATP11BQ9Y2G3 1177 aa27.7■■■□□ 2.02
PFDN2-201ENST00000368010 SYN1P17600 705 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 NKX3-2P78367 333 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 IRX5P78411 483 aaPredicted RBP27.69■■■□□ 2.02
PFDN2-201ENST00000368010 GNASQ5JWF2 1037 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 C1orf53Q5VUE5 145 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 APOA5Q6Q788 366 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 SRBD1Q8N5C6 995 aaKnown RBP27.69■■■□□ 2.02
PFDN2-201ENST00000368010 FANCBQ8NB91 859 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 STARD7Q9NQZ5 370 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 Q9Y3F1 56 aa27.69■■■□□ 2.02
PFDN2-201ENST00000368010 RBM47A0AV96 593 aaKnown RBP27.68■■■□□ 2.02
PFDN2-201ENST00000368010 FGD1P98174 961 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 TRIM60Q495X7 471 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 DUSP28Q4G0W2 176 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 ARHGEF16Q5VV41 709 aa27.68■■■□□ 2.02
PFDN2-201ENST00000368010 BLOC1S2Q6QNY1 142 aa27.68■■■□□ 2.02
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms