RNA–Protein interactions for RNA: ENST00000367047.5

CD46-209, Transcript of CD46 molecule, humanhuman

TSL 5 BASIC

Gene CD46, Length 3,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-209ENST00000367047 ZWILCHQ9H900 591 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 GDF3Q9NR23 364 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 SAMD15Q9P1V8 674 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 TRIM33Q9UPN9 1127 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 CD2APQ9Y5K6 639 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 CAMSAP1Q5T5Y3 1602 aa9.28□□□□□ -0.92
CD46-209ENST00000367047 PFDN1O60925 122 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 VIMP08670 466 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 ALDH1B1P30837 517 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 RAD23BP54727 409 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 ITIH3Q06033 890 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 ZNF844Q08AG5 666 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 RUFY4Q6ZNE9 571 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 CCDC155Q8N6L0 562 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 ANKRD13CQ8N6S4 541 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 XPO6Q96QU8 1125 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 NHEJ1Q9H9Q4 299 aaPredicted RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 NKX1-2Q9UD57 310 aaPredicted RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 PHF24Q9UPV7 400 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 SHBGP04278 402 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 MYL6BP14649 208 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 TCP1P17987 556 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 RXRAP19793 462 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 TNFRSF8P28908 595 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 HAND2P61296 217 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 SFSWAPQ12872 951 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 SLC39A6Q13433 755 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 SEPT2Q15019 361 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 MREGQ8N565 214 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 C1orf131Q8NDD1 294 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 VCXQ9H320 206 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 ZNHIT6Q9NWK9 470 aaKnown RBP9.27□□□□□ -0.93
CD46-209ENST00000367047 HYOU1Q9Y4L1 999 aa9.27□□□□□ -0.93
CD46-209ENST00000367047 RARAP10276 462 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 DESP17661 470 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 DPYDQ12882 1025 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 LBRQ14739 615 aaKnown RBP9.26□□□□□ -0.93
CD46-209ENST00000367047 SPA17Q15506 151 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 KRT71Q3SY84 523 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 FBF1Q8TES7 1133 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 WHAMMQ8TF30 809 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 LZTS2Q9BRK4 669 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 EIF4ENIF1Q9NRA8 985 aaKnown RBP9.26□□□□□ -0.93
CD46-209ENST00000367047 AGPAT5Q9NUQ2 364 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 LNPEPQ9UIQ6 1025 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 MYH15Q9Y2K3 1946 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 KCNJ18B7U540 433 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 SMAPO00193 183 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 BIRC3Q13489 604 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 KCNJ12Q14500 433 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 SEPT14Q6ZU15 432 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 KLHL7Q8IXQ5 586 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 LRRC34Q8IZ02 419 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
CD46-209ENST00000367047 UCMAQ8WVF2 138 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 PHKBQ93100 1093 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 SELENOSQ9BQE4 189 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 PLCB1Q9NQ66 1216 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 ATXN10Q9UBB4 475 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 ZNF510Q9Y2H8 683 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 LRRC42Q9Y546 428 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 JCADQ9P266 1359 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 ZNF609O15014 1411 aa9.26□□□□□ -0.93
CD46-209ENST00000367047 MAP2P11137 1827 aaKnown RBP9.26□□□□□ -0.93
CD46-209ENST00000367047 PPP1R3GB7ZBB8 358 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 FLOT1O75955 427 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 MMEP08473 750 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 FAM200BP0CF97 657 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 GSTT1P30711 240 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 ZRSR2Q15696 482 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 RRAGBQ5VZM2 374 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 OVOS2A0A0G2JMS6 1433 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 OVOS2A0A0J9YW53 1432 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 OVOS2Q6IE36 1432 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 ABCC1P33527 1531 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 LRRC10BA6NIK2 292 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 H0Y3Z8 333 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 SEMA3EO15041 775 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 ACTN4O43707 911 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 USO1O60763 962 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 PAEPP09466 180 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 HSPA9P38646 679 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 IFNAR2P48551 515 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 CCNG1P51959 295 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 SGSM1Q2NKQ1 1148 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 CFAP221Q4G0U5 840 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 PABPC1LQ4VXU2 614 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 TCP11X2Q5H9J9 407 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 ERMARDQ5T6L9 678 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 RASIP1Q5U651 963 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 FOXB2Q5VYV0 432 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 CACNA2D4Q7Z3S7 1137 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 DDX42Q86XP3 938 aaKnown RBP eCLIP9.25□□□□□ -0.931e-9■■■□□ 17.6
CD46-209ENST00000367047 RETREG2Q8NC44 543 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 PCMTD1Q96MG8 357 aaPredicted RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 SLX1AQ9BQ83 275 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 MOV10L1Q9BXT6 1211 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 LIMA1Q9UHB6 759 aaKnown RBP9.25□□□□□ -0.93
CD46-209ENST00000367047 HPS5Q9UPZ3 1129 aa9.25□□□□□ -0.93
CD46-209ENST00000367047 BZW2Q9Y6E2 419 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms