RNA–Protein interactions for RNA: ENST00000367042.5

CD46-208, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,326 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-208ENST00000367042 NKX1-1Q15270 411 aaPredicted RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 LRRC41Q15345 812 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 EFCAB13Q8IY85 973 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 SPATA4Q8NEY3 305 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 CALML4Q96GE6 196 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TSGA10Q9BZW7 698 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 VIPAS39Q9H9C1 493 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 SAP30BPQ9UHR5 308 aaKnown RBP9.1□□□□□ -0.95
CD46-208ENST00000367042 PCDHA4Q9UN74 947 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 PCDHA13Q9Y5I0 950 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 TOGARAM1Q9Y4F4 1720 aa9.1□□□□□ -0.95
CD46-208ENST00000367042 PDS5AQ29RF7 1337 aaKnown RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 KRT14P02533 472 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 IRAK1P51617 712 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 SETQ01105 290 aaPredicted RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 GUCY2DQ02846 1103 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 NPY5RQ15761 445 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 TXNRD1Q16881 649 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 CCDC40Q4G0X9 1142 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 CFAP58Q5T655 872 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 PAPD7Q5XG87 772 aaKnown RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 FBXW10Q5XX13 1052 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 TBC1D7Q9P0N9 293 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 A0A1W2PQC6 194 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 SRGNP10124 158 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 CCNE1P24864 410 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 GFPT1Q06210 699 aaPredicted RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 SF3A3Q12874 501 aaKnown RBP eCLIP9.09□□□□□ -0.951e-6■■■■□ 20.9
CD46-208ENST00000367042 PPFIA1Q13136 1202 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 ODF2Q5BJF6 829 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 ARL6IP4Q66PJ3 421 aaKnown RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 KLHL7Q8IXQ5 586 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 CCDC43Q96MW1 224 aaKnown RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 RIOK1Q9BRS2 568 aaKnown RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 KANSL2Q9H9L4 492 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 SNX12Q9UMY4 172 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 PACSIN2Q9UNF0 486 aaPredicted RBP9.09□□□□□ -0.95
CD46-208ENST00000367042 KCPQ6ZWJ8 1503 aa9.09□□□□□ -0.95
CD46-208ENST00000367042 MYH7P12883 1935 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 NKRFO15226 690 aaKnown RBP eCLIP9.08□□□□□ -0.96
CD46-208ENST00000367042 ATP2C2O75185 946 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 FTCDO95954 541 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 IL6STP40189 918 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 AMPD3Q01432 767 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 MECOMQ03112 1051 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 CCDC170Q8IYT3 715 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 CCDC155Q8N6L0 562 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 OTUD6BQ8N6M0 293 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 SLC44A5Q8NCS7 719 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 ARL8AQ96BM9 186 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 OSBPL9Q96SU4 736 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 EPB41L5Q9HCM4 733 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 DCP1AQ9NPI6 582 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 NFU1Q9UMS0 254 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 HYOU1Q9Y4L1 999 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 CAPN7Q9Y6W3 813 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 A0A087WUV0 522 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 TARSL2A2RTX5 802 aaKnown RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 LRRC53A6NM62 1247 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 PRPF6O94906 941 aaKnown RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 KCNQ4P56696 695 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 NAALADL2Q58DX5 795 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 TTI2Q6NXR4 508 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 SMIM5Q71RC9 77 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 TNFRSF25Q93038 417 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 MTA3Q9BTC8 594 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 BIN2Q9UBW5 565 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 AKAP11Q9UKA4 1901 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 ZSCAN5CA6NGD5 496 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 GOLGA6L10A6NI86 522 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 KLRK1P26718 216 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 NOP2P46087 812 aaKnown RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 CNNM4Q6P4Q7 775 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 ZNF34Q8IZ26 560 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 GIMAP8Q8ND71 665 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 DHTKD1Q96HY7 919 aaPredicted RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 STIM2Q9P246 746 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 SEC63Q9UGP8 760 aaKnown RBP9.08□□□□□ -0.96
CD46-208ENST00000367042 TJP1Q07157 1748 aa9.08□□□□□ -0.96
CD46-208ENST00000367042 MYH2Q9UKX2 1941 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 ANO9A1A5B4 782 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 AGPSO00116 658 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 HEXIM1O94992 359 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 OR52Z1P0C646 297 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 AARSP49588 968 aaKnown RBP eCLIP9.07□□□□□ -0.96
CD46-208ENST00000367042 RAPGEF1Q13905 1077 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 SV2BQ7L1I2 683 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 FNBP4Q8N3X1 1017 aaPredicted RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 ZNF507Q8TCN5 953 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 NOX5Q96PH1 765 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 KRT12Q99456 494 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 DUSP9Q99956 384 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 BRIP1Q9BX63 1249 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 NDST4Q9H3R1 872 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 RBM12Q9NTZ6 932 aaKnown RBP9.07□□□□□ -0.96
CD46-208ENST00000367042 SMCO2A6NFE2 343 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 ERVV-1B6SEH8 477 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 GOLGA8KD6RF30 607 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 TRAF5O00463 557 aa9.07□□□□□ -0.96
CD46-208ENST00000367042 EPHB6O15197 1021 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms