RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 GOLGA8KD6RF30 607 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 FAM13AO94988 1023 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 FGFR2P21802 821 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SMARCA1P28370 1054 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZKSCAN8Q15776 578 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ZNF827Q17R98 1081 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ERFEQ4G0M1 354 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 C10orf76Q5T2E6 689 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRIM68Q6AZZ1 485 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 C8orf74Q6P047 294 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 FNBP4Q8N3X1 1017 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 FOSP01100 380 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 BIRC2Q13490 618 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPP1R18Q6NYC8 613 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 MIER3Q7Z3K6 550 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SFMBT2Q5VUG0 894 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ARMCX5Q6P1M9 558 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 CNOT6LQ96LI5 555 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PCDHA12Q9UN75 941 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ATP1A3P13637 1013 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 DESP17661 470 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 HPDP32754 393 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PAK2Q13177 524 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 MUM1Q2TAK8 710 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 RC3H1Q5TC82 1133 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLC35F6Q8N357 371 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 LRRC45Q96CN5 670 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 CABS1Q96KC9 395 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 EDEM3Q9BZQ6 932 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 MAPK8IP1Q9UQF2 711 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 BZW2Q9Y6E2 419 aaKnown RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 NFAT5O94916 1531 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PVALEFA0A1B0GWK0 134 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 ANO9A1A5B4 782 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 TPD52P55327 224 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 LONRF2Q1L5Z9 754 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 PHLDB2Q86SQ0 1253 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 UBLCP1Q8WVY7 318 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 RUBCNQ92622 972 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 N4BP2L2Q92802 583 aaPredicted RBP5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 CCDC77Q9BR77 488 aa5.91□□□□□ -1.46
CDC42BPA-204ENST00000366767 CLCN6P51797 869 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 LRRC63Q05C16 580 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 GRAPQ13588 217 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 DIXDC1Q155Q3 683 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 ICE2Q659A1 982 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 MAPKAPK5Q8IW41 473 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 SUPT20HQ8NEM7 779 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 GRAPLQ8TC17 118 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 EXOC4Q96A65 974 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 TACO1Q9BSH4 297 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNK9Q9NPC2 374 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 SDAD1Q9NVU7 687 aaKnown RBP eCLIP5.9□□□□□ -1.462e-6■■■■■ 39.6
CDC42BPA-204ENST00000366767 ABCC6O95255 1503 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 SMIM23A6NLE4 172 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 DKC1O60832 514 aaKnown RBP eCLIP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 TRIM37O94972 964 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 SLC4A8Q2Y0W8 1093 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 METTL16Q86W50 562 aaKnown RBP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 ENAHQ8N8S7 591 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 PIK3R5Q8WYR1 880 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 STAMQ92783 540 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 PLIN2Q99541 437 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 KCNG1Q9UIX4 513 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 IKBKGQ9Y6K9 419 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 A0A1B0GTH6 734 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 MACROD2A1Z1Q3 448 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 NDUFA10O95299 355 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 TECP42680 631 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 MECOMQ03112 1051 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 PTPAQ15257 358 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 BTDP43251 543 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 NR1I3Q14994 352 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 INF2Q27J81 1249 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 E4F1Q66K89 784 aaPredicted RBP5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 PPP4R3CPQ6ZMV5 832 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 NARFQ9UHQ1 456 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 MRFAP1Q9Y605 127 aa5.9□□□□□ -1.46
CDC42BPA-204ENST00000366767 E7EVH7 732 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 RUFY4Q6ZNE9 571 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 RAB3IPQ96QF0 476 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 L2HGDHQ9H9P8 463 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 RPSAP08865 295 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 MTMR3Q13615 1198 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 GRM4Q14833 912 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 CNKSR2Q8WXI2 1034 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 LARP4BQ92615 738 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 IFIH1Q9BYX4 1025 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCSER1Q9C0I3 900 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 GPCPD1Q9NPB8 672 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 FRMD4BQ9Y2L6 1034 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 LOC102724159A0A0B4J2E5 919 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 GOLGA6BA6NDN3 693 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 KLHL30Q0D2K2 578 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 ARID5BQ14865 1188 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 PWP2Q15269 919 aaKnown RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 PPP4R3AQ6IN85 833 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 FBXO38Q6PIJ6 1188 aa5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 SAMD1Q6SPF0 538 aaPredicted RBP5.9□□□□□ -1.47
CDC42BPA-204ENST00000366767 CCDC110Q8TBZ0 833 aa5.9□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms