RNA–Protein interactions for RNA: ENST00000366216.6

CSNK1E-202, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 1,005 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-202ENST00000366216 SERPINB13Q9UIV8 391 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 MYH4Q9Y623 1939 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 SYNRGQ9UMZ2 1314 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 ZNF318Q5VUA4 2279 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 TRIOO75962 3097 aa13.09□□□□□ -0.31
CSNK1E-202ENST00000366216 ADCY6O43306 1168 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 PDIA4P13667 645 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 FGD1P98174 961 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 ST3GAL1Q11201 340 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 PPP2R2DQ66LE6 453 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 CCDC83Q8IWF9 413 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 KLHDC9Q8NEP7 349 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 SDR42E1Q8WUS8 393 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 KHSRPQ92945 711 aaKnown RBP eCLIP13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 TNPO1Q92973 898 aaKnown RBP13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 BRF1Q92994 677 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 ZNF274Q96GC6 653 aaPredicted RBP13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 MTA3Q9BTC8 594 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 KRT23Q9C075 422 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 CABP5Q9NP86 173 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 IL23AQ9NPF7 189 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 SMC3Q9UQE7 1217 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 ELP1O95163 1332 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 TANC1Q9C0D5 1861 aa13.08□□□□□ -0.32
CSNK1E-202ENST00000366216 PRC1O43663 620 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 TLL1O43897 1013 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 PFKFB2O60825 505 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 CDK7P50613 346 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 ANTXR2P58335 489 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 PPARAQ07869 468 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 TMEM132BQ14DG7 1078 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 SBK1Q52WX2 424 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 MFSD6Q6ZSS7 791 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 GTF3C6Q969F1 213 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 VWCEQ96DN2 955 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 TMEM87BQ96K49 555 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 GLT1D1Q96MS3 346 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 GBP4Q96PP9 640 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 MMP19Q99542 508 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 LRRC2Q9BYS8 371 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 PPP1R12CQ9BZL4 782 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 DIS3Q9Y2L1 958 aaKnown RBP13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 TET1Q8NFU7 2136 aa13.07□□□□□ -0.32
CSNK1E-202ENST00000366216 SIP14410 1827 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 BRD1O95696 1058 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 FGBP02675 491 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 FGRP09769 529 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 CYP2D6P10635 497 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 POU3F3P20264 500 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 CYP2C18P33260 490 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 NT5C2P49902 561 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 MRE11P49959 708 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 RABGGTBP53611 331 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 CTDSPL2Q05D32 466 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 NBR1Q14596 966 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 ZNF792Q3KQV3 632 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 FAM126BQ8IXS8 530 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 NECAB1Q8N987 351 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 LLPHQ9BRT6 129 aaKnown RBP13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 DCP1AQ9NPI6 582 aaPredicted RBP13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 COG5Q9UP83 839 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 CNPY2Q9Y2B0 182 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 PCDHA11Q9Y5I1 949 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 NEDD4P46934 1319 aa13.06□□□□□ -0.32
CSNK1E-202ENST00000366216 B4E1Z4 1266 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 TLR3O15455 904 aaKnown RBP13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 FLOT1O75955 427 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 SLC25A27O95847 323 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 MYOGP15173 224 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 CST5P28325 142 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 MCM4P33991 863 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 USP5P45974 858 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 APOBRQ0VD83 1088 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 CTR9Q6PD62 1173 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 CYB5R4Q7L1T6 521 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 OTOP2Q7RTS6 562 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 SPICE1Q8N0Z3 855 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 VTI1AQ96AJ9 217 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 FBXO28Q9NVF7 368 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 ARPP21Q9UBL0 812 aaPredicted RBP13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 ADAMTS5Q9UNA0 930 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 ZDHHC9Q9Y397 364 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 MTCH2Q9Y6C9 303 aa13.05□□□□□ -0.32
CSNK1E-202ENST00000366216 A0A0U1RQG5 324 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 MINDY4BA8MYZ0 360 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 PI4K2BG5E9Z4 385 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 ARVCFO00192 962 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 SH2B2O14492 632 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 SNAI1O95863 264 aaPredicted RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 ASGR1P07306 291 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 GJB2P29033 226 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 PDIA3P30101 505 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 LIFRP42702 1097 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 PKP1Q13835 747 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 KCTD2Q14681 263 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 CHST3Q7LGC8 479 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 TTC6Q86TZ1 520 aa13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 PCSK9Q8NBP7 692 aaKnown RBP13.04□□□□□ -0.32
CSNK1E-202ENST00000366216 REPS2Q8NFH8 660 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms