RNA–Protein interactions for RNA: ENST00000363313.1

RNU6-238P-201, Transcript of RNA, U6 small nuclear 238, pseudogene, humanhuman

BASIC

Gene RNU6-238P, Length 106 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-238P-201ENST00000363313 SEMA4AQ9H3S1 761 aa4.34□□□□□ -1.71
RNU6-238P-201ENST00000363313 HCFC2Q9Y5Z7 792 aa4.34□□□□□ -1.71
RNU6-238P-201ENST00000363313 FHOD1Q9Y613 1164 aa4.34□□□□□ -1.71
RNU6-238P-201ENST00000363313 MROH6A6NGR9 719 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 TLR3O15455 904 aaKnown RBP4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 SLPIP03973 132 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 PMS1P54277 932 aaKnown RBP4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 POU4F1Q01851 419 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 RGL3Q3MIN7 710 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 RCSD1Q6JBY9 416 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 Q8N1X5 172 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 SMARCC2Q8TAQ2 1214 aa4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 SCAND2PQ9GZW5 306 aaPredicted RBP4.33□□□□□ -1.72
RNU6-238P-201ENST00000363313 C9orf118A6NHY6 69 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 F6X3S4 739 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 SHOXO15266 292 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 MC3RP41968 323 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 NOL9Q5SY16 702 aaKnown RBP4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 EEF1DP3Q658K8 133 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 PLEKHH3Q7Z736 793 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 CCDC144CPQ8IYA2 1237 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 TTLL6Q8N841 843 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 SH3RF3Q8TEJ3 882 aaPredicted RBP4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 ZBTB8AQ96BR9 441 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 FCRL3Q96P31 734 aaPredicted RBP4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 PLA2G2DQ9UNK4 145 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 INVSQ9Y283 1065 aa4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 DIS3Q9Y2L1 958 aaKnown RBP4.32□□□□□ -1.72
RNU6-238P-201ENST00000363313 CYP2C8P10632 490 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 IMPDH2P12268 514 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 THBS2P35442 1172 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 SLITRK4Q8IW52 837 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 LZTR1Q8N653 840 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 KYQ8NBH2 561 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 ZNF296Q8WUU4 475 aaPredicted RBP4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 NOX5Q96PH1 765 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 SLC9A7Q96T83 725 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 GP6Q9HCN6 339 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 NGRNQ9NPE2 291 aaKnown RBP4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 KBTBD4Q9NVX7 518 aa4.31□□□□□ -1.72
RNU6-238P-201ENST00000363313 ZNF536O15090 1300 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 TRBV23OR9-2A0A075B6M9 112 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 H0Y8X5 98 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 ZNF445P59923 1031 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 CLCQ05315 142 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 CDSNQ15517 529 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 SPRED1Q7Z699 444 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 C14orf37Q86TY3 774 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 LCORQ96JN0 433 aaPredicted RBP4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 C11orf84Q9BUA3 381 aaPredicted RBP4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 ZNF747Q9BV97 191 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 NT5C1AQ9BXI3 368 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 PCED1AQ9H1Q7 454 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 MRS2Q9HD23 443 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 TESMINQ9Y4I5 508 aa4.3□□□□□ -1.72
RNU6-238P-201ENST00000363313 LAMTOR5O43504 91 aa4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 CD247P20963 164 aa4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 GK5Q6ZS86 529 aa4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 DNERQ8NFT8 737 aa4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 KLC2Q9H0B6 622 aa4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP4.29□□□□□ -1.72
RNU6-238P-201ENST00000363313 C9IYK1 514 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 ITGA4P13612 1032 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 TACR1P25103 407 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 CRKP46108 304 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 APOBRQ0VD83 1088 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 TCEAL1Q15170 157 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 SEZ6Q53EL9 994 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 FIBCD1Q8N539 461 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 TXNDC5Q8NBS9 432 aaKnown RBP4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 TM9SF2Q99805 663 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 ARID3AQ99856 593 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 GORASP1Q9BQQ3 440 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 MTA3Q9BTC8 594 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 VPS11Q9H270 941 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 CD248Q9HCU0 757 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 VTI1BQ9UEU0 232 aa4.28□□□□□ -1.72
RNU6-238P-201ENST00000363313 MCM4P33991 863 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 PRR31Q5SQ13 230 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 ETV3LQ6ZN32 361 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 ERICH6Q7L0X2 663 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 FBXO33Q7Z6M2 555 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZC3H18Q86VM9 953 aaKnown RBP4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 MIB1Q86YT6 1006 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 ZFPM1Q8IX07 1006 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 NKD1Q969G9 470 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 RNF34Q969K3 372 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 ST6GALNAC2Q9UJ37 374 aa4.27□□□□□ -1.73
RNU6-238P-201ENST00000363313 NPEPPSL1A6NEC2 478 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 AURKAO14965 403 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 EPHB4P54760 987 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 SMAD4Q13485 552 aaKnown RBP4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 CRB2Q5IJ48 1285 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 AXDND1Q5T1B0 1012 aaPredicted RBP4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 WWC2Q6AWC2 1192 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 DCP2Q8IU60 420 aaKnown RBP4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 RBBP8NLQ8NC74 664 aaPredicted RBP4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 DDX11Q96FC9 970 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 COPRSQ9NQ92 184 aa4.26□□□□□ -1.73
RNU6-238P-201ENST00000363313 PPP4R1LQ9P1A2 415 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms