RNA–Protein interactions for RNA: ENST00000360286.2

SUDS3-201, Transcript of SDS3 homolog, SIN3A corepressor complex component, humanhuman

TSL 5

Gene SUDS3, Length 510 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUDS3-201ENST00000360286 AKAP17AQ02040 695 aaKnown RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 PKN2Q16513 984 aaKnown RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 PFKFB3Q16875 520 aaPredicted RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 CPLX2Q6PUV4 134 aaKnown RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 RNF207Q6ZRF8 634 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 HEATR3Q7Z4Q2 680 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 FAM133AQ8N9E0 248 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 RGS22Q8NE09 1264 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 SYTL5Q8TDW5 730 aaPredicted RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 SOCS4Q8WXH5 440 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 TRIB2Q92519 343 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 SHISA4Q96DD7 197 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 TMX3Q96JJ7 454 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 MAML3Q96JK9 1138 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 FGD4Q96M96 766 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 TAAR1Q96RJ0 339 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 RNF26Q9BY78 433 aaPredicted RBP7.41□□□□□ -1.22
SUDS3-201ENST00000360286 COL20A1Q9P218 1284 aa7.41□□□□□ -1.22
SUDS3-201ENST00000360286 SMCO2A6NFE2 343 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 MEIS2O14770 477 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 MYCP01106 439 aaPredicted RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 HOXC6P09630 235 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 XRCC5P13010 732 aaKnown RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 SCG2P13521 617 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 GRK4P32298 578 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 CYP2C19P33261 490 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 NAPAP54920 295 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 TRAF1Q13077 416 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 PRAMEF19Q5SWL8 479 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 USP17L6PQ6QN14 398 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 FCHSD1Q86WN1 690 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 MCF2L2Q86YR7 1114 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 NSUN7Q8NE18 718 aaKnown RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 PXYLP1Q8TE99 480 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 APBA2Q99767 749 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 PSTPIP2Q9H939 334 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 SH2B1Q9NRF2 756 aaPredicted RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 GJB4Q9NTQ9 266 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 BARHL2Q9NY43 387 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 SLC5A4Q9NY91 659 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 VPS54Q9P1Q0 977 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 ORC3Q9UBD5 711 aaPredicted RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 BIN2Q9UBW5 565 aaPredicted RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 DIS3Q9Y2L1 958 aaKnown RBP7.4□□□□□ -1.22
SUDS3-201ENST00000360286 ASTN1O14525 1302 aa7.4□□□□□ -1.22
SUDS3-201ENST00000360286 LCTP09848 1927 aa7.4□□□□□ -1.23
SUDS3-201ENST00000360286 MCM3APO60318 1980 aa7.4□□□□□ -1.23
SUDS3-201ENST00000360286 PFASO15067 1338 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 GCOM1H8Y6P7 765 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-201ENST00000360286 CDKL5O76039 1030 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 DEXIO95424 95 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 SNAI1O95863 264 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-201ENST00000360286 IGHA2P01877 340 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 INHAP05111 366 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 POLR2MP0CAP2 368 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 MCM2P49736 904 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 ALDH5A1P51649 535 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-201ENST00000360286 HSD17B4P51659 736 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 FOSBP53539 338 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 UBXN2AP68543 259 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 GHRHRQ02643 423 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 CACNB2Q08289 660 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-201ENST00000360286 MTFR1Q15390 333 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 UBE2SQ16763 222 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 SLC9C1Q4G0N8 1177 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 OLFML2BQ68BL8 750 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 TRIM22Q8IYM9 498 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 SLAIN1Q8ND83 568 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 TRPV1Q8NER1 839 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 SMARCC2Q8TAQ2 1214 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 ZFP91Q96JP5 570 aaPredicted RBP7.39□□□□□ -1.23
SUDS3-201ENST00000360286 TINF2Q9BSI4 451 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 TMEM260Q9NX78 707 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 KCNJ14Q9UNX9 436 aa7.39□□□□□ -1.23
SUDS3-201ENST00000360286 HTTP42858 3142 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 HMGCRP04035 888 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 EIF2AK2P19525 551 aaKnown RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 CCND3P30281 292 aaPredicted RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 ADCY7P51828 1080 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 MRPL12P52815 198 aaKnown RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 NLRP5P59047 1200 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 ARHGEF16Q5VV41 709 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 JAKMIP3Q5VZ66 844 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 MFSD14CQ5VZR4 134 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 EEPD1Q7L9B9 569 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 ZNF467Q7Z7K2 595 aaPredicted RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 TRMT44Q8IYL2 757 aaKnown RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 SAMD3Q8N6K7 520 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 IL27Q8NEV9 243 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 CUL5Q93034 780 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 PGBD1Q96JS3 809 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 PKNOX2Q96KN3 472 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 RMDN3Q96TC7 470 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 LLPHQ9BRT6 129 aaKnown RBP7.38□□□□□ -1.23
SUDS3-201ENST00000360286 ALG1Q9BT22 464 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 ZMYND12Q9H0C1 365 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 UNC93B1Q9H1C4 597 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 RIC8AQ9NPQ8 531 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 PXMP2Q9NR77 195 aa7.38□□□□□ -1.23
SUDS3-201ENST00000360286 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms