RNA–Protein interactions for RNA: ENST00000360016.9

BRD4-202, Transcript of bromodomain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene BRD4, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD4-202ENST00000360016 PSTPIP2Q9H939 334 aa22.74■■□□□ 1.23
BRD4-202ENST00000360016 SEMA3FQ13275 785 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 RTKN2Q8IZC4 609 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 TEX33O43247 280 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 FXR2P51116 673 aaKnown RBP eCLIP22.73■■□□□ 1.234e-7■■□□□ 13
BRD4-202ENST00000360016 QRICH1Q2TAL8 776 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 LRRN4CLQ8ND94 238 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 MAPK8IP1Q9UQF2 711 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 PSME4Q14997 1843 aa22.73■■□□□ 1.23
BRD4-202ENST00000360016 COL2A1P02458 1487 aaPredicted RBP22.73■■□□□ 1.23
BRD4-202ENST00000360016 ADSSL1Q8N142 457 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 ZSWIM4Q9H7M6 989 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 RHOBTB3O94955 611 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 PPP4R3AQ6IN85 833 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 RSBN1LQ6PCB5 846 aaPredicted RBP22.72■■□□□ 1.23
BRD4-202ENST00000360016 CALML4Q96GE6 196 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 PPP1R13BQ96KQ4 1090 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 LRWD1Q9UFC0 647 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 F5H6K3 240 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 KLRC3Q07444 240 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 CSRNP1Q96S65 589 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 PSMD1Q99460 953 aa22.72■■□□□ 1.23
BRD4-202ENST00000360016 TMEM266Q2M3C6 531 aa22.71■■□□□ 1.23
BRD4-202ENST00000360016 FILIP1LQ4L180 1135 aa22.71■■□□□ 1.23
BRD4-202ENST00000360016 TMEM139Q8IV31 216 aa22.71■■□□□ 1.23
BRD4-202ENST00000360016 TC2NQ8N9U0 490 aa22.71■■□□□ 1.23
BRD4-202ENST00000360016 GMCL1P1Q8NEA9 526 aa22.71■■□□□ 1.23
BRD4-202ENST00000360016 RBM26Q5T8P6 1007 aaKnown RBP22.71■■□□□ 1.23
BRD4-202ENST00000360016 JAG1P78504 1218 aa22.7■■□□□ 1.23
BRD4-202ENST00000360016 CDC37Q16543 378 aaPredicted RBP22.7■■□□□ 1.23
BRD4-202ENST00000360016 GIMAP8Q8ND71 665 aaPredicted RBP22.7■■□□□ 1.23
BRD4-202ENST00000360016 C7orf25Q9BPX7 421 aa22.7■■□□□ 1.23
BRD4-202ENST00000360016 GLT8D2Q9H1C3 349 aa22.7■■□□□ 1.23
BRD4-202ENST00000360016 LIMA1Q9UHB6 759 aaKnown RBP22.7■■□□□ 1.23
BRD4-202ENST00000360016 ATF5Q9Y2D1 282 aaPredicted RBP22.7■■□□□ 1.23
BRD4-202ENST00000360016 PCDHA1Q9Y5I3 950 aa22.7■■□□□ 1.23
BRD4-202ENST00000360016 RAD17O75943 681 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 PDIA5Q14554 519 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 CREBRFQ8IUR6 639 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 PLCD3Q8N3E9 789 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 BBXQ8WY36 941 aaPredicted RBP22.7■■□□□ 1.22
BRD4-202ENST00000360016 TRIM9Q9C026 710 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 SPDYE2BA6NHP3 402 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 GH2P01242 217 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 SPDYE6P0CI01 402 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 PBX1P40424 430 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 ADKP55263 362 aaKnown RBP22.7■■□□□ 1.22
BRD4-202ENST00000360016 RAB34Q9BZG1 259 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 TMOD2Q9NZR1 351 aa22.7■■□□□ 1.22
BRD4-202ENST00000360016 LRRC10BA6NIK2 292 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 SPAG1Q07617 926 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 RRP1BQ14684 758 aaKnown RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 LARGE2Q8N3Y3 721 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 GMCL1Q96IK5 515 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 KIF2AO00139 706 aaPredicted RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 PSMD14O00487 310 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 VIL1P09327 827 aaKnown RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 KCNA3P22001 575 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 AMPD3Q01432 767 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 KRT31Q15323 416 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 BAG1Q99933 345 aaPredicted RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 DDX25Q9UHL0 483 aaKnown RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 ARFGEF1Q9Y6D6 1849 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 TCP10L2B9ZVM9 353 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 NDUFB10O96000 172 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 GRB10Q13322 594 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 ERCC6LQ2NKX8 1250 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 GMLQ99445 158 aa22.69■■□□□ 1.22
BRD4-202ENST00000360016 ZNF277Q9NRM2 450 aaPredicted RBP22.69■■□□□ 1.22
BRD4-202ENST00000360016 H7C1D1 291 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 ARHGAP6O43182 974 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 CCP110O43303 1012 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 DPEP1P16444 411 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 STIM1Q13586 685 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 CCDC47Q96A33 483 aaKnown RBP22.68■■□□□ 1.22
BRD4-202ENST00000360016 NUP88Q99567 741 aaPredicted RBP22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L15C9J2P7 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L13C9JLJ4 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L11C9JVI0 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L18D6R9N7 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L22D6RA61 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L17D6RBQ6 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L19D6RCP7 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L20D6RJB6 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L24Q0WX57 530 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 USP17L6PQ6QN14 398 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 SYT10Q6XYQ8 523 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 HERC5Q9UII4 1024 aaKnown RBP22.68■■□□□ 1.22
BRD4-202ENST00000360016 HDAC9Q9UKV0 1011 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 MYH7BA7E2Y1 1941 aa22.68■■□□□ 1.22
BRD4-202ENST00000360016 GCFC2P16383 781 aaKnown RBP22.67■■□□□ 1.22
BRD4-202ENST00000360016 TCP11X2Q5H9J9 407 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 FCHSD1Q86WN1 690 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 PNMA5Q96PV4 448 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 XPO5Q9HAV4 1204 aaKnown RBP eCLIP22.67■■□□□ 1.222e-7■□□□□ 9.6
BRD4-202ENST00000360016 CLRN2A0PK11 232 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 POTEMA6NI47 508 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 KCNJ18B7U540 433 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 STX10O60499 249 aa22.67■■□□□ 1.22
BRD4-202ENST00000360016 CCT6AP40227 531 aaKnown RBP22.67■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms