RNA–Protein interactions for RNA: ENST00000360004.5

HLA-DRB1-201, Transcript of major histocompatibility complex, class II, DR beta 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DRB1, Length 1,229 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DRB1-201ENST00000360004 MRPL12P52815 198 aaKnown RBP22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 SCRN1Q12765 414 aa22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 RGS22Q8NE09 1264 aa22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 IL27Q8NEV9 243 aa22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 ZSCAN31Q96LW9 406 aaPredicted RBP22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 FLRT1Q9NZU1 646 aa22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 CNPY2Q9Y2B0 182 aa22.09■■□□□ 1.13
HLA-DRB1-201ENST00000360004 DNAJC25-GNG10A0A024R161 153 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 ASB14A6NK59 587 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 hCG_1984214I3L0E3 225 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 PRPF3O43395 683 aaKnown RBP22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 ZNF713Q8N859 430 aaPredicted RBP22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 NECAB1Q8N987 351 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 SMARCC2Q8TAQ2 1214 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 ZNF333Q96JL9 665 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 TINF2Q9BSI4 451 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 RNF26Q9BY78 433 aaPredicted RBP22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 MAF1Q9H063 256 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 RNF208Q9H0X6 261 aa22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 HMX1Q9NP08 348 aaPredicted RBP22.08■■□□□ 1.13
HLA-DRB1-201ENST00000360004 SCG2P13521 617 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 FUT2Q10981 343 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 TRIM32Q13049 653 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ME3Q16798 604 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 WWC2Q6AWC2 1192 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ZNF467Q7Z7K2 595 aaPredicted RBP22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 MSL3Q8N5Y2 521 aaKnown RBP22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 FAM133AQ8N9E0 248 aa22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CCDC12Q8WUD4 166 aaPredicted RBP22.07■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CCL5P13501 91 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 HOXA13P31271 388 aaPredicted RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CACNB2Q08289 660 aaPredicted RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PFKFB3Q16875 520 aaPredicted RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PPP1R18Q6NYC8 613 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 FCHSD1Q86WN1 690 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SAMD3Q8N6K7 520 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 TBC1D5Q92609 795 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 GTF3C6Q969F1 213 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PSTPIP2Q9H939 334 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SH2B1Q9NRF2 756 aaPredicted RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 MAP3K20Q9NYL2 800 aaKnown RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ZHX1Q9UKY1 873 aaPredicted RBP22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 RPTORQ8N122 1335 aa22.06■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SOWAHBA6NEL2 793 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 DEXIO95424 95 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 LARGE1O95461 756 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PDE4DQ08499 809 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 MTFR1Q15390 333 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 NTRK3Q16288 839 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ARHGEF16Q5VV41 709 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ARMCX2Q7L311 632 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SYTL5Q8TDW5 730 aaPredicted RBP22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PURBQ96QR8 312 aaKnown RBP22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 UNC93B1Q9H1C4 597 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SYNGAP1Q96PV0 1343 aa22.05■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ZNFX1Q9P2E3 1918 aaKnown RBP22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 MCM2P49736 904 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ALDH5A1P51649 535 aaPredicted RBP22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ADCY7P51828 1080 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CCDC83Q8IWF9 413 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CCDC148Q8NFR7 591 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 DNERQ8NFT8 737 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 NSUN6Q8TEA1 469 aaKnown RBP22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 RMDN3Q96TC7 470 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 XRN2Q9H0D6 950 aaKnown RBP eCLIP22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CDKN2AIPQ9NXV6 580 aaPredicted RBP22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 BARHL2Q9NY43 387 aa22.04■■□□□ 1.12
HLA-DRB1-201ENST00000360004 HSD17B4P51659 736 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PRAMEF19Q5SWL8 479 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 WASF1Q92558 559 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 TAAR1Q96RJ0 339 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 GLT8D2Q9H1C3 349 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 PLXNA1Q9UIW2 1896 aa22.03■■□□□ 1.12
HLA-DRB1-201ENST00000360004 RBBP6Q7Z6E9 1792 aaKnown RBP22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SMCO2A6NFE2 343 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 STXBP3O00186 592 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 OPLAHO14841 1288 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 CAPN15O75808 1086 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 XBP1P17861 261 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 EIF2AK2P19525 551 aaKnown RBP22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 MAMDC4Q6UXC1 1216 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 EHMT1Q9H9B1 1298 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 C6orf50Q9HD87 102 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 ORC3Q9UBD5 711 aaPredicted RBP22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 SMCHD1A6NHR9 2005 aa22.02■■□□□ 1.12
HLA-DRB1-201ENST00000360004 LOC102724159A0A0B4J2E5 919 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 SPDYE3A6NKU9 549 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 CCND3P30281 292 aaPredicted RBP22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 PWP2Q15269 919 aaKnown RBP22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 USP17L6PQ6QN14 398 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 EEPD1Q7L9B9 569 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 FGD4Q96M96 766 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 DEFB118Q96PH6 123 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 ABHD16BQ9H3Z7 469 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 NRBP1Q9UHY1 535 aa22.01■■□□□ 1.11
HLA-DRB1-201ENST00000360004 CYBAP13498 195 aa22■■□□□ 1.11
HLA-DRB1-201ENST00000360004 GNA11P29992 359 aa22■■□□□ 1.11
HLA-DRB1-201ENST00000360004 SOX10P56693 466 aa22■■□□□ 1.11
HLA-DRB1-201ENST00000360004 NLRP5P59047 1200 aa22■■□□□ 1.11
HLA-DRB1-201ENST00000360004 PKN1Q16512 942 aa22■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms