RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 SLFN13Q68D06 897 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 PPP4R3AQ6IN85 833 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 KCTD1Q719H9 257 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 RTKN2Q8IZC4 609 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 GMCL1P1Q8NEA9 526 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 NELFBQ8WX92 580 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 CALML4Q96GE6 196 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 PSMD1Q99460 953 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 ADD3Q9UEY8 706 aaKnown RBP16.76■□□□□ 0.27
GABPB1-202ENST00000359031 SYNPO2Q9UMS6 1093 aa16.76■□□□□ 0.27
GABPB1-202ENST00000359031 FAM196BA6NMK8 535 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 KLRC4O43908 158 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 GCFC2P16383 781 aaKnown RBP16.75■□□□□ 0.27
GABPB1-202ENST00000359031 TNNI2P48788 182 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 STIM1Q13586 685 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 ABCB5Q2M3G0 1257 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 KMT5BQ4FZB7 885 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 ANKRD20A12PQ8NF67 263 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 PPP1R13BQ96KQ4 1090 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 TDRD3Q9H7E2 651 aaKnown RBP16.75■□□□□ 0.27
GABPB1-202ENST00000359031 TMOD2Q9NZR1 351 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 STK17AQ9UEE5 414 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 LIMA1Q9UHB6 759 aaKnown RBP16.75■□□□□ 0.27
GABPB1-202ENST00000359031 ITIH6Q6UXX5 1313 aa16.75■□□□□ 0.27
GABPB1-202ENST00000359031 ARHGAP6O43182 974 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 C21orf2O43822 256 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 SLC16A2P36021 539 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 PPP1R2P41236 205 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 TECP42680 631 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 AMPD3Q01432 767 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 SEPT2Q15019 361 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 ADSSL1Q8N142 457 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 TTLL6Q8N841 843 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 GMCL1Q96IK5 515 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 C7orf25Q9BPX7 421 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 TRMT1Q9NXH9 659 aaKnown RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 GDAQ9Y2T3 454 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 SLC37A4O43826 429 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 TDP2O95551 362 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 PBX1P40424 430 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 PRCPP42785 496 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 RASSF7Q02833 373 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 CDC37Q16543 378 aaPredicted RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 QRICH1Q2TAL8 776 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 MCTP2Q6DN12 878 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 RSBN1LQ6PCB5 846 aaPredicted RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 TMEM139Q8IV31 216 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 MMTAG2Q9BU76 263 aaKnown RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 PSTPIP2Q9H939 334 aa16.74■□□□□ 0.27
GABPB1-202ENST00000359031 HERC5Q9UII4 1024 aaKnown RBP16.74■□□□□ 0.27
GABPB1-202ENST00000359031 H7C1D1 291 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 STX10O60499 249 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 SLURP2P0DP57 97 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 HOXA7P31268 230 aaPredicted RBP16.73■□□□□ 0.27
GABPB1-202ENST00000359031 TXKP42681 527 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 PDIA5Q14554 519 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 UBE2SQ16763 222 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 RBM26Q5T8P6 1007 aaKnown RBP16.73■□□□□ 0.27
GABPB1-202ENST00000359031 TC2NQ8N9U0 490 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 LRRC15Q8TF66 581 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 BAG1Q99933 345 aaPredicted RBP16.73■□□□□ 0.27
GABPB1-202ENST00000359031 TRIM9Q9C026 710 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 VPS33BQ9H267 617 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 LRWD1Q9UFC0 647 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 HDAC9Q9UKV0 1011 aa16.73■□□□□ 0.27
GABPB1-202ENST00000359031 PSMA7O14818 248 aa16.72■□□□□ 0.27
GABPB1-202ENST00000359031 EDIL3O43854 480 aa16.72■□□□□ 0.27
GABPB1-202ENST00000359031 SIAH1Q8IUQ4 282 aa16.72■□□□□ 0.27
GABPB1-202ENST00000359031 NOC3LQ8WTT2 800 aaKnown RBP16.72■□□□□ 0.27
GABPB1-202ENST00000359031 DHTKD1Q96HY7 919 aaPredicted RBP16.72■□□□□ 0.27
GABPB1-202ENST00000359031 PRMT6Q96LA8 375 aaPredicted RBP16.72■□□□□ 0.27
GABPB1-202ENST00000359031 PLIN2Q99541 437 aa16.72■□□□□ 0.27
GABPB1-202ENST00000359031 EXOC1Q9NV70 894 aa16.72■□□□□ 0.27
GABPB1-202ENST00000359031 DDX25Q9UHL0 483 aaKnown RBP16.72■□□□□ 0.27
GABPB1-202ENST00000359031 SPDYE2BA6NHP3 402 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 LRRC10BA6NIK2 292 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 KCNJ18B7U540 433 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 AKR1B15C9JRZ8 316 aaPredicted RBP16.71■□□□□ 0.27
GABPB1-202ENST00000359031 ZSCAN12O43309 604 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 CTIFO43310 598 aaKnown RBP16.71■□□□□ 0.27
GABPB1-202ENST00000359031 SLC26A4O43511 780 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 GDF11O95390 407 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 SPDYE6P0CI01 402 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 PRELPP51888 382 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 AP3B2Q13367 1082 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 KCNJ12Q14500 433 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 KRT31Q15323 416 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 SHROOM1Q2M3G4 852 aaPredicted RBP16.71■□□□□ 0.27
GABPB1-202ENST00000359031 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 KIF18AQ8NI77 898 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 PANX2Q96RD6 677 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 CSRNP1Q96S65 589 aa16.71■□□□□ 0.27
GABPB1-202ENST00000359031 ZC3H4Q9UPT8 1303 aaKnown RBP16.71■□□□□ 0.27
GABPB1-202ENST00000359031 COL4A5P29400 1685 aa16.7■□□□□ 0.26
GABPB1-202ENST00000359031 F5H6K3 240 aa16.7■□□□□ 0.26
GABPB1-202ENST00000359031 TEX33O43247 280 aa16.7■□□□□ 0.26
GABPB1-202ENST00000359031 NDUFB10O96000 172 aa16.7■□□□□ 0.26
GABPB1-202ENST00000359031 VIL1P09327 827 aaKnown RBP16.7■□□□□ 0.26
GABPB1-202ENST00000359031 HSPA1AP0DMV8 641 aaKnown RBP16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms