RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 GOLPH3LQ9H4A5 285 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 PHBP35232 272 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ZBED6P86452 979 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 HDLBPQ00341 1268 aaKnown RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ADCY2Q08462 1091 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 TTLL7Q6ZT98 887 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ANKRD13CQ8N6S4 541 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 NOD2Q9HC29 1040 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ANLNQ9NQW6 1124 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 SPDYE3A6NKU9 549 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 ECEL1O95672 775 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 KRT10P13645 584 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 LMNB1P20700 586 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CYLC2Q14093 348 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 CRACR2BQ8N4Y2 399 aaPredicted RBP6.62□□□□□ -1.35
VPS13B-203ENST00000358544 RIC8AQ9NPQ8 531 aa6.62□□□□□ -1.35
VPS13B-203ENST00000358544 MAP3K5Q99683 1374 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ESYT3A0FGR9 886 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MAPK13O15264 365 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 LINC00301Q8NCQ3 95 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ZNF473Q8WTR7 871 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 NAP1L4Q99733 375 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 STAP2Q9UGK3 403 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ARL2BPQ9Y2Y0 163 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 PTPRQQ9UMZ3 2332 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 WASLO00401 505 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 CALUO43852 315 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 DCTN3O75935 186 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SERPINB3P29508 390 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 GNA11P29992 359 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SCRN1Q12765 414 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 EP400NLQ6ZTU2 488 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 KRT25Q7Z3Z0 450 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 GRK7Q8WTQ7 553 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MAK16Q9BXY0 300 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 KRT5P13647 590 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TMED2Q15363 201 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 DTHD1Q6ZMT9 781 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 EPSTI1Q96J88 318 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ZKSCAN3Q9BRR0 538 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MCF2P10911 925 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ADCK5Q3MIX3 580 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MSANTD4Q8NCY6 345 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 PGBD1Q96JS3 809 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 IFT140Q96RY7 1462 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SEMA3EO15041 775 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 FAM107AO95990 144 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TRIM42Q8IWZ5 723 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 EFHD1Q9BUP0 239 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 NLRC4Q9NPP4 1024 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ATICP31939 592 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MDH1P40925 334 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 KIF11P52732 1056 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 EIF4A2Q14240 407 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ZNF274Q96GC6 653 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SAMSN1Q9NSI8 373 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TSC22D4Q9Y3Q8 395 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 V9GY48 417 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 CCT8L1PA6NM43 557 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 PHF20L1A8MW92 1017 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TULP2O00295 520 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 COBLO75128 1261 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 HAUS5O94927 633 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 LARGE1O95461 756 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 IRAK1P51617 712 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 KRT80Q6KB66 452 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 PBKQ96KB5 322 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MAGEF1Q9HAY2 307 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TBC1D7Q9P0N9 293 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 FAM200BP0CF97 657 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 CYB5D1Q6P9G0 228 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MAML1Q92585 1016 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 STAMQ92783 540 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SPZ1Q9BXG8 430 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ZC4H2Q9NQZ6 224 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 DLGAP2Q9P1A6 1054 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 LCMT1Q9UIC8 334 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 GRIN2BQ13224 1484 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 GPTP24298 496 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SERPINB4P48594 390 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 NSUN7Q8NE18 718 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TTLL11Q8NHH1 800 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 SGSM3Q96HU1 749 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 NHEJ1Q9H9Q4 299 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ARHGEF9O43307 516 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ACSL3O95573 720 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 APOEP02649 317 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 PARP1P09874 1014 aaKnown RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 CXCR5P32302 372 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ANKRD13DQ6ZTN6 518 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 LZICQ8WZA0 190 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 ITGB1BP2Q9UKP3 347 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 IQSEC3Q9UPP2 1182 aaPredicted RBP6.61□□□□□ -1.35
VPS13B-203ENST00000358544 FRMD4BQ9Y2L6 1034 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 OLFML2BQ68BL8 750 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 CTAGE3PQ8IX95 158 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 MAP4K1Q92918 833 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TBC1D23Q9NUY8 699 aa6.61□□□□□ -1.35
VPS13B-203ENST00000358544 TYW1Q9NV66 732 aaKnown RBP6.61□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms