RNA–Protein interactions for RNA: ENST00000358525.8

SLC6A20-202, Transcript of solute carrier family 6 member 20, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A20, Length 5,423 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A20-202ENST00000358525 TSNARE1Q96NA8 513 aa16.12■□□□□ 0.17
SLC6A20-202ENST00000358525 RASSF4Q9H2L5 321 aa16.12■□□□□ 0.17
SLC6A20-202ENST00000358525 MROH2AA6NES4 1674 aa16.12■□□□□ 0.17
SLC6A20-202ENST00000358525 TCP1P17987 556 aaKnown RBP16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 CALRP27797 417 aaKnown RBP16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 MRRFQ96E11 262 aaKnown RBP16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 CCDC17Q96LX7 622 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 MAK16Q9BXY0 300 aaKnown RBP16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 RABGAP1Q9Y3P9 1069 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 UBE2SQ16763 222 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 CCDC63Q8NA47 563 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 GSG1L2A8MUP6 293 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 GDF11O95390 407 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 UBXN2AP68543 259 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 RUFY4Q6ZNE9 571 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 CELF1Q92879 486 aaKnown RBP16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 NKIRAS1Q9NYS0 192 aa16.11■□□□□ 0.17
SLC6A20-202ENST00000358525 ZBTB16Q05516 673 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 CUL4BQ13620 913 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 B4GALNT4Q76KP1 1039 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 NLGN1Q8N2Q7 840 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 NOP56O00567 594 aaKnown RBP16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 SORBS3O60504 671 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 TEKT3Q9BXF9 490 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 TAF6LQ9Y6J9 622 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 DIP2AQ14689 1571 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 KRIT1O00522 736 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 ATP2A2P16615 1042 aaKnown RBP16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 KRT31Q15323 416 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 PDE11AQ9HCR9 933 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 DISC1Q9NRI5 854 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 RIPOR2Q9Y4F9 1068 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 TRIM37O94972 964 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 TNNI1P19237 187 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 NR2F2P24468 414 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 EXOC3L4Q17RC7 722 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 C6orf163Q5TEZ5 329 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 DHX40Q8IX18 779 aaKnown RBP16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 METTL14Q9HCE5 456 aaKnown RBP16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 GDAQ9Y2T3 454 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 COL15A1P39059 1388 aa16.1■□□□□ 0.17
SLC6A20-202ENST00000358525 FOSP01100 380 aaPredicted RBP16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 MYL1P05976 194 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 PRR29P0C7W0 189 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 UAP1Q16222 522 aaPredicted RBP16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 DGKHQ86XP1 1220 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 CEP57Q86XR8 500 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 MXRA7P84157 204 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 ALX1Q15699 326 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 TCP11X2Q5H9J9 407 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 ARHGEF16Q5VV41 709 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 CLRN2A0PK11 232 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 EHHADHQ08426 723 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 XKR9Q5GH70 373 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 PANX2Q96RD6 677 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 CSRNP1Q96S65 589 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 C1orf167Q5SNV9 1468 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 CCNE1P24864 410 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 SMCR8Q8TEV9 937 aaPredicted RBP16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 CPVLQ9H3G5 476 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 THAP9Q9H5L6 903 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 STK17AQ9UEE5 414 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 MEIS1O00470 390 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 ATP5DP30049 168 aa16.09■□□□□ 0.17
SLC6A20-202ENST00000358525 GTF2A1P52655 376 aaPredicted RBP16.08■□□□□ 0.17
SLC6A20-202ENST00000358525 KRT71Q3SY84 523 aa16.08■□□□□ 0.17
SLC6A20-202ENST00000358525 USP32Q8NFA0 1604 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 hCG_1984214I3L0E3 225 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 MTMR3Q13615 1198 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 LRCH2Q5VUJ6 765 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 DCUN1D2Q6PH85 259 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ADAT2Q7Z6V5 191 aaKnown RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ZNF713Q8N859 430 aaPredicted RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ZNF579Q8NAF0 562 aaKnown RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 RETREG2Q8NC44 543 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 H2AFZP0C0S5 128 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 PFKFB3Q16875 520 aaPredicted RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 TBC1D9BQ66K14 1250 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 H2AFVQ71UI9 128 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 OTUD6AQ7L8S5 288 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 BPIFA3Q9BQP9 254 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 DCP1AQ9NPI6 582 aaPredicted RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 CEP170BQ9Y4F5 1589 aaPredicted RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ZMYND10O75800 440 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 STAMBPO95630 424 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 TRIM28Q13263 835 aaKnown RBP16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 PDIA6Q15084 440 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ZSCAN26Q16670 478 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 ODR4Q5SWX8 454 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 FLAD1Q8NFF5 587 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 AZI2Q9H6S1 392 aa16.08■□□□□ 0.16
SLC6A20-202ENST00000358525 CEMIPQ8WUJ3 1361 aa16.07■□□□□ 0.16
SLC6A20-202ENST00000358525 PREX1Q8TCU6 1659 aa16.07■□□□□ 0.16
SLC6A20-202ENST00000358525 GCFC2P16383 781 aaKnown RBP16.07■□□□□ 0.16
SLC6A20-202ENST00000358525 CTNNA1P35221 906 aaKnown RBP16.07■□□□□ 0.16
SLC6A20-202ENST00000358525 SHC4Q6S5L8 630 aa16.07■□□□□ 0.16
SLC6A20-202ENST00000358525 TOGARAM2Q6ZUX3 1019 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms