RNA–Protein interactions for RNA: ENST00000358025.7

SYNE2-204, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE2, Length 21,842 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-204ENST00000358025 NEURL1BA8MQ27 555 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 DHX34Q14147 1143 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 APOA5Q6Q788 366 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ACEP12821 1306 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 DAB2IPQ5VWQ8 1189 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 MFN1Q8IWA4 741 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SERPINB12Q96P63 405 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ANKRD2Q9GZV1 360 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 VCPKMTQ9H867 229 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CHCHD3Q9NX63 227 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 AFMP43652 599 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PPP2R2AP63151 447 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 HAUS3Q68CZ6 603 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 KDM7AQ6ZMT4 941 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 TMEM60Q9H2L4 133 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 NEO1Q92859 1461 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ANKRD62A6NC57 917 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SPARCL1Q14515 664 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 RASIP1Q5U651 963 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 DIS3L2Q8IYB7 885 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CRACR2BQ8N4Y2 399 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 MB21D1Q8N884 522 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CHMP6Q96FZ7 201 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SYCP2Q9BX26 1530 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SEL1LQ9UBV2 794 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 MAP3K7O43318 606 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 IFT81Q8WYA0 676 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 HPSEQ9Y251 543 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 LMTK2Q8IWU2 1503 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 A0A0A6YYK5 440 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ADKP55263 362 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 RBL2Q08999 1139 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 USP31Q70CQ4 1352 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 RASGRF2O14827 1237 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 KLC1Q07866 573 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 PREPLQ4J6C6 727 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 NUGGCQ68CJ6 796 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 NBPF5PQ86XG9 351 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CORO1CQ9ULV4 474 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 TTC36A6NLP5 189 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CLTAP09496 248 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 STAT4Q14765 748 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 TTC38Q5R3I4 469 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 GUF1Q8N442 669 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 E9PCH4 1651 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 I3L4J1 428 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 HNRNPH3P31942 346 aaKnown RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF790Q6PG37 636 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 H2AFZP0C0S5 128 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 DNAL1Q4LDG9 190 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 TEDDM1Q5T9Z0 273 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SEL1L2Q5TEA6 688 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 C11orf57Q6ZUT1 292 aaPredicted RBP4.5□□□□□ -1.69
SYNE2-204ENST00000358025 H2AFVQ71UI9 128 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 CABP5Q9NP86 173 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 SAR1AQ9NR31 198 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 ABHD10Q9NUJ1 306 aa4.5□□□□□ -1.69
SYNE2-204ENST00000358025 GGCXP38435 758 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 LIG3P49916 1009 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SH3GL2Q99962 352 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 BTNL10A8MVZ5 291 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 H0YCG3 227 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MFAP3LO75121 409 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TRIM72Q6ZMU5 477 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 FRMD8Q9BZ67 464 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 KAT14Q9H8E8 782 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 GAP43P17677 238 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TEKT1Q969V4 418 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SUFUQ9UMX1 484 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SHROOM2Q13796 1616 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SOS2Q07890 1332 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MMP1P03956 469 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CCNE1P24864 410 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 XRCC4Q13426 336 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SLF1Q9BQI6 1058 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 LIMA1Q9UHB6 759 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TRAF5O00463 557 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 BTNL9Q6UXG8 535 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TCHPQ9BT92 498 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 NHEJ1Q9H9Q4 299 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TUBA8Q9NY65 449 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PA2G4Q9UQ80 394 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 STRNO43815 780 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CCDC14Q49A88 953 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CFAP74Q9C0B2 1584 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 MACROD2A1Z1Q3 448 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SNRPFP62306 86 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 RABL6Q3YEC7 729 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 PARP10Q53GL7 1025 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 UBLCP1Q8WVY7 318 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CNKSR2Q8WXI2 1034 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 ZNF398Q8TD17 642 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 HVCN1Q96D96 273 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CMTM5Q96DZ9 223 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 TRERF1Q96PN7 1200 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 SERPINI1Q99574 410 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 KDM6AO15550 1401 aaPredicted RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 CTNNA1P35221 906 aaKnown RBP4.49□□□□□ -1.69
SYNE2-204ENST00000358025 DBN1Q16643 649 aa4.49□□□□□ -1.69
SYNE2-204ENST00000358025 POP5Q969H6 163 aaKnown RBP4.49□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms