RNA–Protein interactions for RNA: ENST00000357568.7

CAPN3-205, Transcript of calpain 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAPN3, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-205ENST00000357568 CHUKO15111 745 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 PDE8AO60658 829 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 HNRNPH3P31942 346 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 ARL6IP4Q66PJ3 421 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 MFSD6Q6ZSS7 791 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 SND1Q7KZF4 910 aaKnown RBP eCLIP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 CREG2Q8IUH2 290 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 IFNL3Q8IZI9 196 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 ADSSL1Q8N142 457 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 TNFRSF25Q93038 417 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 AIDAQ96BJ3 306 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 RUFY1Q96T51 708 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 NAPBQ9H115 298 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 TRIM10Q9UDY6 481 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 TSKSQ9UJT2 592 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 RIPOR2Q9Y4F9 1068 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 ANKRD65E5RJM6 399 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 PDE2AO00408 941 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 IRS4O14654 1257 aaPredicted RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 ENC1O14682 589 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 USO1O60763 962 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 TACC1O75410 805 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 KIF5AQ12840 1032 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 IRF2BP1Q8IU81 584 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 OTUD6BQ8N6M0 293 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 EIF1ADQ8N9N8 165 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 MAGEC3Q8TD91 643 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 MYL10Q9BUA6 226 aa11.86□□□□□ -0.51
CAPN3-205ENST00000357568 GNL3LQ9NVN8 582 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 RBM28Q9NW13 759 aaKnown RBP11.86□□□□□ -0.51
CAPN3-205ENST00000357568 MYH6P13533 1939 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 NDUFAB1O14561 156 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 LCA5LO95447 670 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 RPN1P04843 607 aaKnown RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 IDEP14735 1019 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 CDC25AP30304 524 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 SMTNP53814 917 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 TGFB2P61812 414 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 IFIT5Q13325 482 aaKnown RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 ZNF654Q8IZM8 581 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 OXER1Q8TDS5 423 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 FAM89AQ96GI7 184 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 EPN3Q9H201 632 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 EPB41L4AQ9HCS5 686 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 PIH1D3Q9NQM4 214 aaKnown RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 HYOU1Q9Y4L1 999 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 SF3B3Q15393 1217 aaKnown RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 TTC38Q5R3I4 469 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 CCDC50Q8IVM0 306 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 FAM114A1Q8IWE2 563 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 SMYD4Q8IYR2 804 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 NLRP3Q96P20 1036 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 NACAP1Q9BZK3 213 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 ACTR5Q9H9F9 607 aaPredicted RBP11.85□□□□□ -0.51
CAPN3-205ENST00000357568 STIM2Q9P246 746 aa11.85□□□□□ -0.51
CAPN3-205ENST00000357568 UBE2Q2LH0YL09 131 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 HOXA7P31268 230 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 LONP1P36776 959 aaKnown RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CTDSPL2Q05D32 466 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 ARHGAP27Q6ZUM4 889 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 VGLL2Q8N8G2 317 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 SPATA4Q8NEY3 305 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 MAGEC2Q9UBF1 373 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 SRGAP2O75044 1071 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CALM1P0DP23 149 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CALM2P0DP24 149 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CALM3P0DP25 149 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 NAP1L1P55209 391 aaKnown RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 TTMPQ5BVD1 217 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 DHTKD1Q96HY7 919 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CAPZA3Q96KX2 299 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 VCPKMTQ9H867 229 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 NHEJ1Q9H9Q4 299 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 MAGEF1Q9HAY2 307 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 EXOC1Q9NV70 894 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 CAPN7Q9Y6W3 813 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 MYH2Q9UKX2 1941 aa11.84□□□□□ -0.51
CAPN3-205ENST00000357568 COL11A2P13942 1736 aaPredicted RBP11.84□□□□□ -0.51
CAPN3-205ENST00000357568 FUT2Q10981 343 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 NEDD9Q14511 834 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 PKN1Q16512 942 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 CRY2Q49AN0 593 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 PREPLQ4J6C6 727 aaPredicted RBP11.83□□□□□ -0.51
CAPN3-205ENST00000357568 METTL24Q5JXM2 366 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 FBXW10Q5XX13 1052 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 ALS2CR12Q96Q35 445 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 ERGIC2Q96RQ1 377 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 ANAPC4Q9UJX5 808 aa11.83□□□□□ -0.51
CAPN3-205ENST00000357568 HMGB1P1B2RPK0 211 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PJA2O43164 708 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 CTSWP56202 376 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 ACTN3Q08043 901 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-205ENST00000357568 C2orf54Q08AI8 447 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 SPA17Q15506 151 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 COBLL1Q53SF7 1204 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 PPP4R3AQ6IN85 833 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 ZSCAN29Q8IWY8 852 aaPredicted RBP11.83□□□□□ -0.52
CAPN3-205ENST00000357568 IFT20Q8IY31 132 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 IQCKQ8N0W5 287 aa11.83□□□□□ -0.52
CAPN3-205ENST00000357568 P3H4Q92791 437 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 93.8 ms