RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 IPO4Q8TEX9 1081 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 LARP4BQ92615 738 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 SELENOOQ9BVL4 669 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 TMEM60Q9H2L4 133 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 BSDC1Q9NW68 430 aaPredicted RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 SAMM50Q9Y512 469 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 LTN1O94822 1766 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 CNTNAP5Q8WYK1 1306 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 TLDC2A0PJX2 215 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 POTEMA6NI47 508 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 NCK2O43639 380 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 ZRANB2O95218 330 aaKnown RBP eCLIP7.57□□□□□ -1.2
RTN4-203ENST00000357376 HLA-DOAP06340 250 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 FGFR2P21802 821 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 NKX1-1Q15270 411 aaPredicted RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 PKN1Q16512 942 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 ASIC2Q16515 512 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 MFSD14BQ5SR56 506 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 MICALCLQ6ZW33 695 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 RSRC2Q7L4I2 434 aaKnown RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 MYOCDQ8IZQ8 938 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 CNBD1Q8NA66 436 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 SH3RF3Q8TEJ3 882 aaPredicted RBP7.57□□□□□ -1.2
RTN4-203ENST00000357376 C8orf37Q96NL8 207 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 CAPS2Q9BXY5 557 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 NDST4Q9H3R1 872 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 KANSL2Q9H9L4 492 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 KCND1Q9NSA2 647 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 SMARCAL1Q9NZC9 954 aa7.57□□□□□ -1.2
RTN4-203ENST00000357376 WNT7AO00755 349 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 ABL1P00519 1130 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 TCP1P17987 556 aaKnown RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 KLRK1P26718 216 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 KIAA0753Q2KHM9 967 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 NFRKBQ6P4R8 1299 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 VGLL2Q8N8G2 317 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 MTA3Q9BTC8 594 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 CTDP1Q9Y5B0 961 aaPredicted RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 PCDHA13Q9Y5I0 950 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 TMEM110-MUSTN1A8MSY1 372 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 KCNK3O14649 394 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 CETN3O15182 167 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 KRT13P13646 458 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 PLCG2P16885 1265 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 MRPL12P52815 198 aaKnown RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 SEC23AQ15436 765 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 BEND6Q5SZJ8 279 aaPredicted RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 ANKRD40Q6AI12 368 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 TMEM139Q8IV31 216 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 SYCP3Q8IZU3 236 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 ADSSL1Q8N142 457 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 DYDC1Q8WWB3 177 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 PPM1EQ8WY54 764 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 KRT12Q99456 494 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 ANKZF1Q9H8Y5 726 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 CCNL1Q9UK58 526 aaPredicted RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 DUSP10Q9Y6W6 482 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 ESYT3A0FGR9 886 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 VEGFAP15692 232 aaPredicted RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 INPP5BP32019 993 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 USP14P54578 494 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 STK4Q13043 487 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 PAK2Q13177 524 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 IFI16Q16666 785 aaKnown RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 UBE2SQ16763 222 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 FAM26FQ5R3K3 315 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 CDKAL1Q5VV42 579 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 NSUN4Q96CB9 384 aaKnown RBP7.56□□□□□ -1.2
RTN4-203ENST00000357376 TMEM47Q9BQJ4 181 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 LZTS2Q9BRK4 669 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 TMEM260Q9NX78 707 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 JRKLQ9Y4A0 524 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 RIC1Q4ADV7 1423 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 NALCNQ8IZF0 1738 aa7.56□□□□□ -1.2
RTN4-203ENST00000357376 TOPAZ1Q8N9V7 1692 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 KCNQ2O43526 872 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 CHMP2AO43633 222 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 SLC16A2P36021 539 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 DPP8Q6V1X1 898 aaPredicted RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 GPBP1Q86WP2 473 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 CCDC170Q8IYT3 715 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 RETREG2Q8NC44 543 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 ERMNQ8TAM6 284 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 EPB41L5Q9HCM4 733 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 PANK4Q9NVE7 773 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 PCDHA12Q9UN75 941 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 LRRC53A6NM62 1247 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 HEXIM1O94992 359 aaKnown RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 EVX2Q03828 476 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 RPS6KA1Q15418 735 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 MAN2A1Q16706 1144 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 USH1GQ495M9 461 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 CEP85LQ5SZL2 805 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 NT5DC1Q5TFE4 455 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 TMC4Q7Z404 712 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 ADAT2Q7Z6V5 191 aaKnown RBP7.55□□□□□ -1.2
RTN4-203ENST00000357376 DGKHQ86XP1 1220 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 POTEDQ86YR6 584 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 CUL5Q93034 780 aa7.55□□□□□ -1.2
RTN4-203ENST00000357376 PPANQ9NQ55 473 aaKnown RBP7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms