RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 PACSIN2Q9UNF0 486 aaPredicted RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 RIPOR2Q9Y4F9 1068 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 CLTAP09496 248 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 PROCA1Q8NCQ7 364 aaPredicted RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 CALR3Q96L12 384 aaKnown RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 OSBPL9Q96SU4 736 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 TACO1Q9BSH4 297 aaKnown RBP13.86□□□□□ -0.19
BDNF-202ENST00000356660 DPH5Q9H2P9 285 aa13.86□□□□□ -0.19
BDNF-202ENST00000356660 PTPRUQ92729 1446 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 KIF1CO43896 1103 aaKnown RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 SCG2P13521 617 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 HIBADHP31937 336 aaKnown RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 CTSWP56202 376 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 RASGRF1Q13972 1273 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 TMC4Q7Z404 712 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 NELFCDQ8IXH7 590 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 CACNA2D3Q8IZS8 1091 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 ZBTB38Q8NAP3 1195 aaPredicted RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 NBPF3Q9H094 633 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 ZBTB1Q9Y2K1 713 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 ITSN1Q15811 1721 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 BUB1BO60566 1050 aaPredicted RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 HLA-DOAP06340 250 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 PLEKP08567 350 aaPredicted RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 TECP42680 631 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 SARSP49591 514 aaKnown RBP13.85□□□□□ -0.19
BDNF-202ENST00000356660 NEDD9Q14511 834 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 KIAA0753Q2KHM9 967 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 NAA35Q5VZE5 725 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 EMBQ6PCB8 327 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 SLC24A3Q9HC58 644 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 PEX19P40855 299 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 BLIDQ8IZY5 108 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 ANKS4BQ8N8V4 417 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.85□□□□□ -0.19
BDNF-202ENST00000356660 HPS3Q969F9 1004 aa13.85□□□□□ -0.19
BDNF-202ENST00000356660 STK36Q9NRP7 1315 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 PSMD14O00487 310 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 PSEN1P49768 467 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 SNCBQ16143 134 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 ALS2CLQ60I27 953 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 SV2BQ7L1I2 683 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 CCDC170Q8IYT3 715 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 TCP11Q8WWU5 503 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 P2RX5Q93086 422 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 TARSL2A2RTX5 802 aaKnown RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 MEFVO15553 781 aaPredicted RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 PCCAP05165 728 aaPredicted RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 LRRC41Q15345 812 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 RPS6KA1Q15418 735 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 CDKAL1Q5VV42 579 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 ZIM3Q96PE6 472 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 SNX12Q9UMY4 172 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 WDR19Q8NEZ3 1342 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 GSG1L2A8MUP6 293 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 CHUKO15111 745 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 PPP1R12BO60237 982 aaPredicted RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 KRT13P13646 458 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 DYNLL1P63167 89 aaKnown RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 KLHL30Q0D2K2 578 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 EARS2Q5JPH6 523 aaKnown RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 CNNM4Q6P4Q7 775 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 CCDC84Q86UT8 332 aaPredicted RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 VPS36Q86VN1 386 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 CCDC25Q86WR0 208 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 ATG3Q9NT62 314 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 FAM217BQ9NTX9 383 aaPredicted RBP13.84□□□□□ -0.19
BDNF-202ENST00000356660 DONSONQ9NYP3 566 aa13.84□□□□□ -0.19
BDNF-202ENST00000356660 NEFHP12036 1026 aa13.83□□□□□ -0.19
BDNF-202ENST00000356660 PDE6BP35913 854 aa13.83□□□□□ -0.19
BDNF-202ENST00000356660 LRRC45Q96CN5 670 aa13.83□□□□□ -0.19
BDNF-202ENST00000356660 RSRC1Q96IZ7 334 aaKnown RBP13.83□□□□□ -0.19
BDNF-202ENST00000356660 UBXN6Q9BZV1 441 aa13.83□□□□□ -0.19
BDNF-202ENST00000356660 GPCPD1Q9NPB8 672 aa13.83□□□□□ -0.19
BDNF-202ENST00000356660 PDE2AO00408 941 aaPredicted RBP13.83□□□□□ -0.2
BDNF-202ENST00000356660 NMT2O60551 498 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 TOM1O60784 492 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 CARSP49589 748 aaKnown RBP13.83□□□□□ -0.2
BDNF-202ENST00000356660 MMP14P50281 582 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 POLR2FP61218 127 aaKnown RBP13.83□□□□□ -0.2
BDNF-202ENST00000356660 RUFY4Q6ZNE9 571 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 CUL5Q93034 780 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 EPB41L4AQ9HCS5 686 aaPredicted RBP13.83□□□□□ -0.2
BDNF-202ENST00000356660 CCDC87Q9NVE4 849 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 CAPN11Q9UMQ6 739 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 PLAAQ9Y263 795 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 GNAQP50148 359 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 HERVK_113P62684 666 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 GFPT1Q06210 699 aaPredicted RBP13.83□□□□□ -0.2
BDNF-202ENST00000356660 MED15Q96RN5 788 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 ITIH6Q6UXX5 1313 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 TMEM94Q12767 1356 aa13.83□□□□□ -0.2
BDNF-202ENST00000356660 ANO9A1A5B4 782 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 GOLGA8HP0CJ92 632 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 SFMBT2Q5VUG0 894 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 HIBCHQ6NVY1 386 aaPredicted RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 DAAM2Q86T65 1068 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 TEX11Q8IYF3 940 aa13.82□□□□□ -0.2
BDNF-202ENST00000356660 RNPC3Q96LT9 517 aaKnown RBP13.82□□□□□ -0.2
BDNF-202ENST00000356660 CCNL1Q9UK58 526 aaPredicted RBP13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms