RNA–Protein interactions for RNA: ENST00000356135.9

CHKA-202, Transcript of choline kinase alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHKA, Length 1,755 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKA-202ENST00000356135 PNMA2Q9UL42 364 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 CCDC194A0A1B0GVG4 234 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 NOGQ13253 232 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 RIOX2Q8IUF8 465 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 CNPY2Q9Y2B0 182 aa27.5■■□□□ 1.99
CHKA-202ENST00000356135 GCOM1H8Y6P7 765 aaPredicted RBP27.49■■□□□ 1.99
CHKA-202ENST00000356135 WNT7AO00755 349 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 TRAK2O60296 914 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 POLR2MP0CAP2 368 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 NCLP19338 710 aaKnown RBP27.49■■□□□ 1.99
CHKA-202ENST00000356135 ERVK-9P63128 1117 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 ERVK-24P63145 666 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 FCHSD1Q86WN1 690 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 NCAPG2Q86XI2 1143 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 USP28Q96RU2 1077 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 GLT8D2Q9H1C3 349 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 GDPD2Q9HCC8 539 aa27.49■■□□□ 1.99
CHKA-202ENST00000356135 TAF1CQ15572 869 aaPredicted RBP27.48■■□□□ 1.99
CHKA-202ENST00000356135 INF2Q27J81 1249 aa27.48■■□□□ 1.99
CHKA-202ENST00000356135 SKOR2Q2VWA4 1001 aaPredicted RBP27.48■■□□□ 1.99
CHKA-202ENST00000356135 NSMFQ6X4W1 530 aa27.48■■□□□ 1.99
CHKA-202ENST00000356135 LMBRD1Q9NUN5 540 aa27.48■■□□□ 1.99
CHKA-202ENST00000356135 PIK3CDO00329 1044 aa27.48■■□□□ 1.99
CHKA-202ENST00000356135 ERCC3P19447 782 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 KRT25Q7Z3Z0 450 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 MCF2L2Q86YR7 1114 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 GPRC5AQ8NFJ5 357 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 PURBQ96QR8 312 aaKnown RBP27.47■■□□□ 1.99
CHKA-202ENST00000356135 ACAD9Q9H845 621 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 COL20A1Q9P218 1284 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 CPA4Q9UI42 421 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 CLIC4Q9Y696 253 aa27.47■■□□□ 1.99
CHKA-202ENST00000356135 GCLCP48506 637 aaPredicted RBP27.46■■□□□ 1.99
CHKA-202ENST00000356135 VEGFBP49765 207 aa27.46■■□□□ 1.99
CHKA-202ENST00000356135 HSD17B4P51659 736 aa27.46■■□□□ 1.99
CHKA-202ENST00000356135 RPS6P62753 249 aaKnown RBP27.46■■□□□ 1.99
CHKA-202ENST00000356135 NONOQ15233 471 aaKnown RBP eCLIP27.46■■□□□ 1.99
CHKA-202ENST00000356135 TKFCQ3LXA3 575 aa27.46■■□□□ 1.99
CHKA-202ENST00000356135 SLC30A10Q6XR72 485 aa27.46■■□□□ 1.99
CHKA-202ENST00000356135 TBCKQ8TEA7 893 aa27.46■■□□□ 1.99
CHKA-202ENST00000356135 GTF3C2Q8WUA4 911 aaPredicted RBP27.46■■□□□ 1.99
CHKA-202ENST00000356135 ZCCHC17Q9NP64 241 aaKnown RBP27.46■■□□□ 1.99
CHKA-202ENST00000356135 BAATQ14032 418 aaPredicted RBP27.45■■□□□ 1.99
CHKA-202ENST00000356135 RNF207Q6ZRF8 634 aa27.45■■□□□ 1.99
CHKA-202ENST00000356135 ANO3Q9BYT9 981 aa27.45■■□□□ 1.99
CHKA-202ENST00000356135 PORCNQ9H237 461 aa27.45■■□□□ 1.99
CHKA-202ENST00000356135 EDIL3O43854 480 aa27.45■■□□□ 1.98
CHKA-202ENST00000356135 TMEM87AQ8NBN3 555 aa27.45■■□□□ 1.98
CHKA-202ENST00000356135 CHST13Q8NET6 341 aa27.45■■□□□ 1.98
CHKA-202ENST00000356135 EFCC1Q9HA90 598 aa27.45■■□□□ 1.98
CHKA-202ENST00000356135 PCDHB6Q9Y5E3 794 aa27.45■■□□□ 1.98
CHKA-202ENST00000356135 SPDYE3A6NKU9 549 aa27.44■■□□□ 1.98
CHKA-202ENST00000356135 RILPL1Q5EBL4 403 aa27.44■■□□□ 1.98
CHKA-202ENST00000356135 SYTL5Q8TDW5 730 aaPredicted RBP27.44■■□□□ 1.98
CHKA-202ENST00000356135 ZNF396Q96N95 335 aaPredicted RBP27.44■■□□□ 1.98
CHKA-202ENST00000356135 A1CFQ9NQ94 594 aaKnown RBP27.44■■□□□ 1.98
CHKA-202ENST00000356135 MORF4L1Q9UBU8 362 aa27.44■■□□□ 1.98
CHKA-202ENST00000356135 ADGRA2Q96PE1 1338 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 FIBPO43427 364 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 KRT85P78386 507 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 ECM2O94769 699 aaPredicted RBP27.43■■□□□ 1.98
CHKA-202ENST00000356135 SLC25A27O95847 323 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 GHRHRQ02643 423 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 CRHR2Q13324 411 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 AP3B2Q13367 1082 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 SF3A1Q15459 793 aaKnown RBP27.43■■□□□ 1.98
CHKA-202ENST00000356135 ZNF174Q15697 407 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 WDR78Q5VTH9 848 aa27.43■■□□□ 1.98
CHKA-202ENST00000356135 NOL7Q9UMY1 257 aaKnown RBP27.43■■□□□ 1.98
CHKA-202ENST00000356135 PRPF40AO75400 957 aaKnown RBP27.42■■□□□ 1.98
CHKA-202ENST00000356135 UBXN2AP68543 259 aa27.42■■□□□ 1.98
CHKA-202ENST00000356135 ANO1Q5XXA6 986 aa27.42■■□□□ 1.98
CHKA-202ENST00000356135 TAAR1Q96RJ0 339 aa27.42■■□□□ 1.98
CHKA-202ENST00000356135 CYP39A1Q9NYL5 469 aa27.42■■□□□ 1.98
CHKA-202ENST00000356135 TLR2O60603 784 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 FOSP01100 380 aaPredicted RBP27.41■■□□□ 1.98
CHKA-202ENST00000356135 LETM2Q2VYF4 491 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 TTC38Q5R3I4 469 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 ANKRD35Q8N283 1001 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 ZFYVE28Q9HCC9 887 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 CFAP45Q9UL16 551 aa27.41■■□□□ 1.98
CHKA-202ENST00000356135 FAM110CQ1W6H9 321 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 KLHL40Q2TBA0 621 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 NEK8Q86SG6 692 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 RTEL1Q9NZ71 1219 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 FBXO40Q9UH90 709 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 BCRP11274 1271 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 C17orf99Q6UX52 265 aa27.4■■□□□ 1.98
CHKA-202ENST00000356135 MCM7P33993 719 aa27.39■■□□□ 1.98
CHKA-202ENST00000356135 ZFP91Q96JP5 570 aaPredicted RBP27.39■■□□□ 1.98
CHKA-202ENST00000356135 MROH8Q9H579 483 aa27.39■■□□□ 1.98
CHKA-202ENST00000356135 MAP3K20Q9NYL2 800 aaKnown RBP27.39■■□□□ 1.98
CHKA-202ENST00000356135 MRVI1Q9Y6F6 885 aa27.39■■□□□ 1.98
CHKA-202ENST00000356135 CA12O43570 354 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 CCNT1O60563 726 aaKnown RBP27.38■■□□□ 1.97
CHKA-202ENST00000356135 TRAPPC10P48553 1259 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 CCNA1P78396 465 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 ATL3Q6DD88 541 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 MCTP2Q6DN12 878 aa27.38■■□□□ 1.97
CHKA-202ENST00000356135 LEO1Q8WVC0 666 aaPredicted RBP27.38■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms