RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 ARHGEF1Q92888 912 aaKnown RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 KANSL2Q9H9L4 492 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 CYP4A11Q02928 519 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 KRT31Q15323 416 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 UBE2SQ16763 222 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 EARS2Q5JPH6 523 aaKnown RBP15.54■□□□□ 0.08
SREBF1-202ENST00000355815 SYCP3Q8IZU3 236 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 CUL5Q93034 780 aa15.54■□□□□ 0.08
SREBF1-202ENST00000355815 VSIG1Q86XK7 387 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 CEP63Q96MT8 703 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 EPN1Q9Y6I3 576 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 VEGFAP15692 232 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 CTNNA2P26232 953 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 MAGEA9P43362 315 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 ALX1Q15699 326 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 IFT20Q8IY31 132 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 RDH13Q8NBN7 331 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 OSBPL5Q9H0X9 879 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 MED4Q9NPJ6 270 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 BICDL2A1A5D9 508 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 SPDYE3A6NKU9 549 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 DDAH1O94760 285 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 OR52Z1P0C646 297 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 SF3B2Q13435 895 aaKnown RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 PTPAQ15257 358 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 INTS5Q6P9B9 1019 aaKnown RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 FMNL3Q8IVF7 1028 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 GSPT2Q8IYD1 628 aaKnown RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 DBNDD1Q9H9R9 158 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 FEZ2Q9UHY8 353 aaPredicted RBP15.53■□□□□ 0.08
SREBF1-202ENST00000355815 ARHGAP23Q9P227 1491 aa15.53■□□□□ 0.08
SREBF1-202ENST00000355815 DDX39AO00148 427 aaKnown RBP15.52■□□□□ 0.08
SREBF1-202ENST00000355815 BUB1O43683 1085 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TRIM37O94972 964 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 IFNAR2P48551 515 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 ADCY7P51828 1080 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 ADAT2Q7Z6V5 191 aaKnown RBP15.52■□□□□ 0.08
SREBF1-202ENST00000355815 RBM17Q96I25 401 aaKnown RBP15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TFR2Q9UP52 801 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 MRPL12P52815 198 aaKnown RBP15.52■□□□□ 0.08
SREBF1-202ENST00000355815 AP1ARQ63HQ0 302 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 RASGRP2Q7LDG7 609 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 NEK8Q86SG6 692 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TRIML1Q8N9V2 468 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 NSUN4Q96CB9 384 aaKnown RBP15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TUBGCP2Q9BSJ2 902 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 AGXT2Q9BYV1 514 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 NBPF3Q9H094 633 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TMEM260Q9NX78 707 aa15.52■□□□□ 0.08
SREBF1-202ENST00000355815 TBCAO75347 108 aaKnown RBP15.52■□□□□ 0.07
SREBF1-202ENST00000355815 PLCG1P19174 1290 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 ERCC5P28715 1186 aaPredicted RBP15.52■□□□□ 0.07
SREBF1-202ENST00000355815 PRCPP42785 496 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 NTRK3Q16288 839 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 MCTP2Q6DN12 878 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 INTS8Q75QN2 995 aaKnown RBP15.52■□□□□ 0.07
SREBF1-202ENST00000355815 KRT25Q7Z3Z0 450 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 HOMEZQ8IX15 550 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 GJA10Q969M2 543 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 TMEM47Q9BQJ4 181 aa15.52■□□□□ 0.07
SREBF1-202ENST00000355815 TPX2Q9ULW0 747 aaKnown RBP15.52■□□□□ 0.07
SREBF1-202ENST00000355815 NTSR2O95665 410 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 SESN3P58005 492 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 UBXN2AP68543 259 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 TBC1D10BQ4KMP7 808 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-202ENST00000355815 PCDHA4Q9UN74 947 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 TADA2BQ86TJ2 420 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 FAM217BQ9NTX9 383 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-202ENST00000355815 ABCC12Q96J65 1359 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 SERPINB2P05120 415 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 MAP3K9P80192 1104 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 ATP11AP98196 1134 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 PDCLQ13371 301 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 WHAMMP3Q1A5X7 153 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 C6orf163Q5TEZ5 329 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 MMS22LQ6ZRQ5 1243 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 PTF1AQ7RTS3 328 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 CACNA2D3Q8IZS8 1091 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 ANKRD42Q8N9B4 389 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 LINC00116Q8NCU8 138 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 IFIH1Q9BYX4 1025 aaKnown RBP15.51■□□□□ 0.07
SREBF1-202ENST00000355815 HOMER2Q9NSB8 354 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 ZBTB12Q9Y330 459 aaPredicted RBP15.51■□□□□ 0.07
SREBF1-202ENST00000355815 SRGAP2O75044 1071 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 CFBP00751 764 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 CETN2P41208 172 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 SLC7A5Q01650 507 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 DAAM2Q86T65 1068 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 LRRN4CLQ8ND94 238 aa15.51■□□□□ 0.07
SREBF1-202ENST00000355815 ARHGEF2Q92974 986 aaKnown RBP15.51■□□□□ 0.07
SREBF1-202ENST00000355815 CDK8P49336 464 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 RBM43Q6ZSC3 357 aaKnown RBP15.5■□□□□ 0.07
SREBF1-202ENST00000355815 SMCR8Q8TEV9 937 aaPredicted RBP15.5■□□□□ 0.07
SREBF1-202ENST00000355815 UBR1Q8IWV7 1749 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 MST1RQ04912 1400 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 NRXN3Q9Y4C0 1643 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 CTNNA1P35221 906 aaKnown RBP15.5■□□□□ 0.07
SREBF1-202ENST00000355815 GUCY2DQ02846 1103 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 POTEMA6NI47 508 aa15.5■□□□□ 0.07
SREBF1-202ENST00000355815 USP17L5A8MUK1 530 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms