RNA–Protein interactions for RNA: ENST00000355072.9

HTT-201, Transcript of huntingtin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HTT, Length 13,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-201ENST00000355072 SCP2P22307 547 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 CHMLP26374 656 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 ENO4A6NNW6 628 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 IGSF3O75054 1194 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 PLEKHM2Q8IWE5 1019 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 PPIP5K2O43314 1243 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 FAM192AQ9GZU8 254 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 PLEKHG1Q9ULL1 1385 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 CCDC159P0C7I6 412 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 CNGA3Q16281 694 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 CABP2Q9NPB3 220 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 MYH1P12882 1939 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 MYH2Q9UKX2 1941 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 MYH4Q9Y623 1939 aa8.71□□□□□ -1.01
HTT-201ENST00000355072 NEK8Q86SG6 692 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 DHTKD1Q96HY7 919 aaPredicted RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 RIOK1Q9BRS2 568 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 ABCF2Q9UG63 623 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 DBNLQ9UJU6 430 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 GRIN2AQ12879 1464 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 SNRPA1P09661 255 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 PSMA3P25788 255 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 RSPH1Q8WYR4 309 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 TRIM56Q9BRZ2 755 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 TRPV6Q9H1D0 765 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 ZNF215Q9UL58 517 aaPredicted RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 STK38LQ9Y2H1 464 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 KCNJ18B7U540 433 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 DIAPH2O60879 1101 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 PPP6R2O75170 966 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 IFT88Q13099 833 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 KCNJ12Q14500 433 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 CROCCP3Q8IVE0 287 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 LINS1Q8NG48 757 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 CFAP61Q8NHU2 1237 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 MCM7P33993 719 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 DNAL1Q4LDG9 190 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 MXD3Q9BW11 206 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 SMG5Q9UPR3 1016 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 CTNND2Q9UQB3 1225 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 CDC42BPGQ6DT37 1551 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 HSPA9P38646 679 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 LRRC63Q05C16 580 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 NFE2L3Q9Y4A8 694 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 TMED10P49755 219 aaKnown RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 HACE1Q8IYU2 909 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 MMADHCQ9H3L0 296 aaPredicted RBP8.71□□□□□ -1.02
HTT-201ENST00000355072 ARL2BPQ9Y2Y0 163 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 PFASO15067 1338 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 BIRC2Q13490 618 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 KCTD17Q8N5Z5 321 aa8.71□□□□□ -1.02
HTT-201ENST00000355072 MYOM2P54296 1465 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 SLC26A4O43511 780 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 BFSP1Q12934 665 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 PSMD2Q13200 908 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 MORF4L2Q15014 288 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 ANO5Q75V66 913 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 RHOT2Q8IXI1 618 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 PPP1R13BQ96KQ4 1090 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 FANCAO15360 1455 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 PREX2Q70Z35 1606 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 ST13P50502 369 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 SESTD1Q86VW0 696 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 STX1BP61266 288 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 ZC3H18Q86VM9 953 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 OLFM1Q99784 485 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 STX8Q9UNK0 236 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 PRR23AA6NEV1 266 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 ATF7P17544 494 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 LRMPQ12912 555 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 WDR75Q8IWA0 830 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 ADAMTS12P58397 1594 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 HNRNPCP07910 306 aaKnown RBP eCLIP8.7□□□□□ -1.02
HTT-201ENST00000355072 ST13P5Q8NFI4 369 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.7□□□□□ -1.022e-6■■■■■ 57.7
HTT-201ENST00000355072 FOXP1Q9H334 677 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 TBKBP1A7MCY6 615 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 CASP8Q14790 479 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 H2AFYO75367 372 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 PNMA6AP0CW24 399 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 BEND3Q5T5X7 828 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 NCAPH2Q6IBW4 605 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 DCUN1D2Q6PH85 259 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 TRIML2Q8N7C3 387 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 ALKBH8Q96BT7 664 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 KDM4CQ9H3R0 1056 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 MRPL47Q9HD33 250 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 ENOPH1Q9UHY7 261 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 CHEK2O96017 543 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 HSPA1AP0DMV8 641 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 HSPA1BP0DMV9 641 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 AASDHQ4L235 1098 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 BRDTQ58F21 947 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 SYDE1Q6ZW31 735 aaPredicted RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 TRERF1Q96PN7 1200 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 MCM9Q9NXL9 1143 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 DNAJC12Q9UKB3 198 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 TRAF5O00463 557 aa8.7□□□□□ -1.02
HTT-201ENST00000355072 RNF17Q9BXT8 1623 aaKnown RBP8.7□□□□□ -1.02
HTT-201ENST00000355072 WDR19Q8NEZ3 1342 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms