RNA–Protein interactions for RNA: ENST00000355059.8

NEIL1-201, Transcript of nei like DNA glycosylase 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NEIL1, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-201ENST00000355059 CDC25AP30304 524 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 HOXA13P31271 388 aaPredicted RBP12.46□□□□□ -0.41
NEIL1-201ENST00000355059 INPP5BP32019 993 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 ADCY7P51828 1080 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 SHC4Q6S5L8 630 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 TMEM179Q6ZVK1 233 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 REXO1Q8N1G1 1221 aaKnown RBP12.46□□□□□ -0.41
NEIL1-201ENST00000355059 ZDHHC15Q96MV8 337 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 VPS18Q9P253 973 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 PCDHB6Q9Y5E3 794 aa12.46□□□□□ -0.41
NEIL1-201ENST00000355059 DDAH1O94760 285 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 ASNSP08243 561 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 TRIM21P19474 475 aaKnown RBP12.46□□□□□ -0.42
NEIL1-201ENST00000355059 CASP1P29466 404 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 MATR3P43243 847 aaKnown RBP eCLIP12.46□□□□□ -0.42
NEIL1-201ENST00000355059 PPP4CP60510 307 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 TMEM266Q2M3C6 531 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 CDAN1Q8IWY9 1227 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 IQUBQ8NA54 791 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 ACER1Q8TDN7 264 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 CRACR2AQ9BSW2 395 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 CSRNP2Q9H175 543 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 MAN1B1Q9UKM7 699 aa12.46□□□□□ -0.42
NEIL1-201ENST00000355059 NUP98P52948 1817 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 NFKBIEO00221 500 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 IFNAR1P17181 557 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 ECE1P42892 770 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 DGKHQ86XP1 1220 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 NEK11Q8NG66 645 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 NEDD1Q8NHV4 660 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 CRYBG1Q9Y4K1 1723 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 PCP11498 1178 aaKnown RBP12.45□□□□□ -0.42
NEIL1-201ENST00000355059 HMGCS2P54868 508 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 TTC38Q5R3I4 469 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 FBXO11Q86XK2 927 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 VSTM4Q8IW00 320 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 EEF2KMTQ96G04 330 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 PSTPIP2Q9H939 334 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 TAL1P17542 331 aaPredicted RBP12.45□□□□□ -0.42
NEIL1-201ENST00000355059 RHBDL3P58872 404 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 TMEM132AQ24JP5 1023 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 BLIDQ8IZY5 108 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 CEP112Q8N8E3 955 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 OXER1Q8TDS5 423 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 CHURC1Q8WUH1 139 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 SLF1Q9BQI6 1058 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 ELP3Q9H9T3 547 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 JADE2Q9NQC1 790 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 CCPG1Q9ULG6 757 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 ABT1Q9ULW3 272 aaKnown RBP12.45□□□□□ -0.42
NEIL1-201ENST00000355059 TAF1P21675 1872 aa12.45□□□□□ -0.42
NEIL1-201ENST00000355059 BMP15O95972 392 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 RAD51AP2Q09MP3 1159 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 CNGA4Q8IV77 575 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 SRBD1Q8N5C6 995 aaKnown RBP12.44□□□□□ -0.42
NEIL1-201ENST00000355059 AGBL3Q8NEM8 1001 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 FAM151AQ8WW52 585 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 HOOK2Q96ED9 719 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 MYCBPQ99417 103 aaPredicted RBP12.44□□□□□ -0.42
NEIL1-201ENST00000355059 BMP2KQ9NSY1 1161 aaPredicted RBP12.44□□□□□ -0.42
NEIL1-201ENST00000355059 CEP83Q9Y592 693 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 C4BP0C0L5 1744 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 EGFRP00533 1210 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 KRT9P35527 623 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 SPAG1Q07617 926 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 PSMD1Q99460 953 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 FBXO28Q9NVF7 368 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 MTMR4Q9NYA4 1195 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 ADM5C9JUS6 153 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 GRIN3BO60391 1043 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 SMC1AQ14683 1233 aaKnown RBP12.44□□□□□ -0.42
NEIL1-201ENST00000355059 SPA17Q15506 151 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 SLC10A4Q96EP9 437 aa12.44□□□□□ -0.42
NEIL1-201ENST00000355059 EFCAB8A8MWE9 144 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 ORC4O43929 436 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 ZBED4O75132 1171 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 NONOQ15233 471 aaKnown RBP eCLIP12.43□□□□□ -0.42
NEIL1-201ENST00000355059 TMTC3Q6ZXV5 915 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 NCAPG2Q86XI2 1143 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 TRPM4Q8TD43 1214 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 FMNL1O95466 1100 aaPredicted RBP12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 SBK1Q52WX2 424 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 USP17L6PQ6QN14 398 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 C16orf86Q6ZW13 317 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 EEPD1Q7L9B9 569 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 TXLNBQ8N3L3 684 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 EPSTI1Q96J88 318 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 FAM205CA6NFA0 338 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 SOWAHDA6NJG2 315 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 POTEB2H3BUK9 544 aa12.43□□□□□ -0.42
NEIL1-201ENST00000355059 MMP1P03956 469 aa12.43□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms