RNA–Protein interactions for RNA: ENST00000354500.6

TRPM3-201, Transcript of transient receptor potential cation channel subfamily M member 3, humanhuman

TSL 1 (best)

Gene TRPM3, Length 4,459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM3-201ENST00000354500 HPS3Q969F9 1004 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 PSMD1Q99460 953 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 LRRN2O75325 713 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 TUBB2AQ13885 445 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 PLCD3Q8N3E9 789 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 MGARPQ8TDB4 240 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 CCDC77Q9BR77 488 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 TUBB2BQ9BVA1 445 aa13.46□□□□□ -0.25
TRPM3-201ENST00000354500 LAMC1P11047 1609 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 NDUFA10O95299 355 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 MOCS3O95396 460 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 SMTNP53814 917 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 C2orf54Q08AI8 447 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 TTC31Q49AM3 519 aaPredicted RBP13.46□□□□□ -0.26
TRPM3-201ENST00000354500 TBC1D9BQ66K14 1250 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 ARHGAP27Q6ZUM4 889 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 FBF1Q8TES7 1133 aa13.46□□□□□ -0.26
TRPM3-201ENST00000354500 BSDC1Q9NW68 430 aaPredicted RBP13.46□□□□□ -0.26
TRPM3-201ENST00000354500 DLATP10515 647 aaKnown RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 RXRBP28702 533 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 EIF4A3P38919 411 aaKnown RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 PAK2Q13177 524 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 PPM1KQ8N3J5 372 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 NAP1L4Q99733 375 aaKnown RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 TMEM47Q9BQJ4 181 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 ADAMTS1Q9UHI8 967 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 UTP11Q9Y3A2 253 aaKnown RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 HYOU1Q9Y4L1 999 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 KRIT1O00522 736 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 BUB1BO60566 1050 aaPredicted RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 MMP10P09238 476 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 PRCPP42785 496 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 TRAPPC10P48553 1259 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 ZBTB16Q05516 673 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 CAPN12Q6ZSI9 719 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 CLEC10AQ8IUN9 316 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 KRT12Q99456 494 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 GTF2A1P52655 376 aaPredicted RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 GNGT1P63211 74 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 COL9A3Q14050 684 aaPredicted RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 NKX1-1Q15270 411 aaPredicted RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 FAM133AQ8N9E0 248 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L15C9J2P7 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L13C9JLJ4 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L11C9JVI0 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L18D6R9N7 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L22D6RA61 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L17D6RBQ6 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L19D6RCP7 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L20D6RJB6 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 CD19P15391 556 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L24Q0WX57 530 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L6PQ6QN14 398 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 BCAS4Q8TDM0 211 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 IQCGQ9H095 443 aaKnown RBP13.45□□□□□ -0.26
TRPM3-201ENST00000354500 DISC1Q9NRI5 854 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 TMEM260Q9NX78 707 aa13.45□□□□□ -0.26
TRPM3-201ENST00000354500 CDC42BPGQ6DT37 1551 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 SETBP1Q9Y6X0 1596 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 USP17L5A8MUK1 530 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 PNMA6AP0CW24 399 aaPredicted RBP13.44□□□□□ -0.26
TRPM3-201ENST00000354500 TNNI1P19237 187 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 EXOC3L4Q17RC7 722 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 WDR44Q5JSH3 913 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 ODR4Q5SWX8 454 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 FAM84BQ96KN1 310 aaPredicted RBP13.44□□□□□ -0.26
TRPM3-201ENST00000354500 WDR24Q96S15 920 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 SH2D4AQ9H788 454 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 ST7Q9NRC1 585 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 E7EVH7 732 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 FMR1Q06787 632 aaKnown RBP eCLIP13.44□□□□□ -0.26
TRPM3-201ENST00000354500 MIGA2Q7L4E1 593 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 CSRNP1Q96S65 589 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 FAM204AQ9H8W3 233 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 LEMD3Q9Y2U8 911 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 AP5Z1O43299 807 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 IFNB1P01574 187 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 H2AFZP0C0S5 128 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 GPR162Q16538 588 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 ABCB5Q2M3G0 1257 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 TCP11X2Q5H9J9 407 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 H2AFVQ71UI9 128 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 MIER3Q7Z3K6 550 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 MPHOSPH6Q99547 160 aaKnown RBP13.44□□□□□ -0.26
TRPM3-201ENST00000354500 PCIF1Q9H4Z3 704 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 ABCB6Q9NP58 842 aa13.44□□□□□ -0.26
TRPM3-201ENST00000354500 USP42Q9H9J4 1324 aaKnown RBP13.43□□□□□ -0.26
TRPM3-201ENST00000354500 MFAP3LO75121 409 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 FAM102BQ5T8I3 360 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 ZNF365Q70YC5 407 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 PHLDB2Q86SQ0 1253 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 GLT8D2Q9H1C3 349 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 NEXMIFQ5QGS0 1516 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 CCNE1P24864 410 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 CTNNA1P35221 906 aaKnown RBP13.43□□□□□ -0.26
TRPM3-201ENST00000354500 CCDC63Q8NA47 563 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 NHEJ1Q9H9Q4 299 aaPredicted RBP13.43□□□□□ -0.26
TRPM3-201ENST00000354500 TMOD4Q9NZQ9 345 aa13.43□□□□□ -0.26
TRPM3-201ENST00000354500 HDAC6Q9UBN7 1215 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms