RNA–Protein interactions for RNA: ENST00000354433.7

CDRT1-202, CMT1A duplicated region transcript 1, humanhuman

TSL 2 BASIC

Gene CDRT1, Length 1,557 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDRT1-202ENST00000354433 ASGR1P07306 291 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 PARP1P09874 1014 aaKnown RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 CDC37Q16543 378 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 ASPRV1Q53RT3 343 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 GNASQ5JWF2 1037 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 KLHDC9Q8NEP7 349 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 MPHOSPH6Q99547 160 aaKnown RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 KATNBL1Q9H079 304 aa13.41□□□□□ -0.26
CDRT1-202ENST00000354433 U3KPZ7 1027 aaPredicted RBP13.41□□□□□ -0.26
CDRT1-202ENST00000354433 ERICH2A1L162 156 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 CD2BP2O95400 341 aaKnown RBP13.4□□□□□ -0.26
CDRT1-202ENST00000354433 CST5P28325 142 aaPredicted RBP13.4□□□□□ -0.26
CDRT1-202ENST00000354433 ALDH5A1P51649 535 aaPredicted RBP13.4□□□□□ -0.26
CDRT1-202ENST00000354433 GJA9P57773 515 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 BEX3Q00994 111 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 NECTIN1Q15223 517 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 SH3RF1Q7Z6J0 888 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 BADQ92934 168 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 TM6SF1Q9BZW5 370 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 AP5M1Q9H0R1 490 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 CIZ1Q9ULV3 898 aaPredicted RBP13.4□□□□□ -0.26
CDRT1-202ENST00000354433 SNX14Q9Y5W7 946 aa13.4□□□□□ -0.26
CDRT1-202ENST00000354433 MROH7Q68CQ1 1323 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 SMCHD1A6NHR9 2005 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 DCDC2CA8MYV0 355 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 CYP21A2P08686 494 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 RAG1P15918 1043 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 RPS6P62753 249 aaKnown RBP13.39□□□□□ -0.27
CDRT1-202ENST00000354433 PTH1RQ03431 593 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 LRIT3Q3SXY7 679 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 RNF20Q5VTR2 975 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 UPF3AQ9H1J1 476 aaKnown RBP13.39□□□□□ -0.27
CDRT1-202ENST00000354433 VAT1LQ9HCJ6 419 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 PDGFCQ9NRA1 345 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 TMEM39AQ9NV64 488 aa13.39□□□□□ -0.27
CDRT1-202ENST00000354433 TRIM43BA6NCK2 446 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-202ENST00000354433 SMPD1P17405 629 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 DDIT3P35638 169 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 NEK4P51957 841 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 PDE4DQ08499 809 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 CCSAPQ6IQ19 270 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-202ENST00000354433 CYB5R4Q7L1T6 521 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 ADGRF4Q8IZF3 695 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 CLEC4DQ8WXI8 215 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 ANKS1AQ92625 1134 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 TRIM43Q96BQ3 446 aaPredicted RBP13.38□□□□□ -0.27
CDRT1-202ENST00000354433 CHMP5Q9NZZ3 219 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 RBM8AQ9Y5S9 174 aaKnown RBP13.38□□□□□ -0.27
CDRT1-202ENST00000354433 DNAH12Q6ZR08 3092 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 MCM3APO60318 1980 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 ELP1O95163 1332 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 ABCB11O95342 1321 aa13.38□□□□□ -0.27
CDRT1-202ENST00000354433 A0A0U1RQG5 324 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 IFIT3O14879 490 aaKnown RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 ZEB2O60315 1214 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 PTGS1P23219 599 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 SART3Q15020 963 aaKnown RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 FSCN1Q16658 493 aaKnown RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 QRICH1Q2TAL8 776 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 TSGA10IPQ3SY00 556 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 CXCL17Q6UXB2 119 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 NCOA7Q8NI08 942 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 SLKQ9H2G2 1235 aaPredicted RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 GNEQ9Y223 722 aaKnown RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 LRRC37A2A6NM11 1700 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 B4DLN1 442 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 MRPL12P52815 198 aaKnown RBP13.37□□□□□ -0.27
CDRT1-202ENST00000354433 CREB3L3Q68CJ9 461 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 IQSEC1Q6DN90 963 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 TAPT1Q6NXT6 567 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 ANKRD33Q7Z3H0 272 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 FBXO11Q86XK2 927 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 HOMER1Q86YM7 354 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 TOX2Q96NM4 488 aa13.37□□□□□ -0.27
CDRT1-202ENST00000354433 LTBP2Q14767 1821 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 LOC102724159A0A0B4J2E5 919 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 E7EWF7 191 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 TLR3O15455 904 aaKnown RBP13.36□□□□□ -0.27
CDRT1-202ENST00000354433 HSP90AA1P07900 732 aaKnown RBP13.36□□□□□ -0.27
CDRT1-202ENST00000354433 PSMA5P28066 241 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 WTAPQ15007 396 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 PPP2R5BQ15173 497 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 PWP2Q15269 919 aaKnown RBP13.36□□□□□ -0.27
CDRT1-202ENST00000354433 CHST3Q7LGC8 479 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 MCF2L2Q86YR7 1114 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 RASEFQ8IZ41 740 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 STAG2Q8N3U4 1231 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 DNERQ8NFT8 737 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 MORC4Q8TE76 937 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 WDR11Q9BZH6 1224 aa13.36□□□□□ -0.27
CDRT1-202ENST00000354433 MRPL11Q9Y3B7 192 aaKnown RBP13.36□□□□□ -0.27
CDRT1-202ENST00000354433 KLRF2D3W0D1 207 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 ARVCFO00192 962 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 SLC27A2O14975 620 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 CTAGE5O15320 804 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 ITGB8P26012 769 aa13.35□□□□□ -0.27
CDRT1-202ENST00000354433 FPGSQ05932 587 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.2 ms